Query= MSMg01no347_l16.b1 MSMg01no347_l16.b1 CHROMAT_FILE:
MSMg01no347_l16.b1 PHD_FILE: MSMg01no347_l16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:48 2005
(241 letters)
>mm_chr9_95276016_95276657
Length = 642
Score = 348 bits (180), Expect = e-100
Identities = 214/238 (89%), Gaps = 21/238 (8%)
Strand = Plus / Minus
Query: 5 gaattc-aaacatctctgattattggactttctccttcccctccttgccgcatgcaggtc 63
|||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 384 gaattcaaaacatctctgattattggactttctccttcccctccttgccacatgcaggtc 325
Query: 64 ctggtttctcggaagagagagaagacagtttcagaaggaggaatatagaatctgaaagag 123
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctggtttcttggaagagagagaagacagtttcagaaggaggaatatagaatctgaaagag 265
Query: 124 ggacaaagctgtggtcatatatagtgggagggatatggtctcagagagagatgaggtctc 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ggacaaagctgtggtcatatatagtgggagggatatggtctcagagagagatgag----- 210
Query: 184 acggggagccatgcagtctctaggagaagggtgtggtcttaaggagagggacatggtc 241
|||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 209 ---------------gtctctaggagaagggtgtggtcttaaggagagggacacggtc 167
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 642
Length adjustment: 9
Effective length of query: 232
Effective length of database: 633
Effective search space: 146856
Effective search space used: 146856
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no347_l16.g1 MSMg01no347_l16.g1 CHROMAT_FILE:
MSMg01no347_l16.g1 PHD_FILE: MSMg01no347_l16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:48 2005
(120 letters)
>mm_chr9_95046784_95047303
Length = 520
Score = 217 bits (112), Expect = 2e-61
Identities = 118/120 (98%)
Strand = Plus / Plus
Query: 1 acttggggcacttggagtgatgcttaataaatggtagagttctgttaactttactactta 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 201 acttggggcacttggagtgatgcttagtaaatggtagagttctgttaactttactactta 260
Query: 61 ttgacagccacagatctaaaagaacagcatcatctagtgcatctaacgctcattatcact 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgacagccacagatctaagagaacagcatcatctagtgcatctaacgctcattatcact 320
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 120
Length of database: 520
Length adjustment: 8
Effective length of query: 112
Effective length of database: 512
Effective search space: 57344
Effective search space used: 57344
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
