XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
CTATTATATTTAGAATGTGAAGTATCCTCTCAAACAACTCATGTTTCGGA
GACCTGGTCCCAGCTTGTGATACCAAACACTGAGAGGTGCTTAGGTTGTG
ACAGGTTAATCTACTGGTAGAGTCATAACAATGTGACTTTGGATGATAGT
GGAAGTTGGAGATAGATCTTAGATGGAAGAAGTAGATTCTCAGAGTTTAT
GCTCAAATGATATAGTGTGTCAAAGAATCTTCTGTGGTTCTACATCTCTG
GATTACATTCCTGATGTCAGGGCCTGCCTCCTCTGCTAAGAACACGTCCC
CATTGAATTCCTTTCTCCCCAGCCCATGCTCATTCACCTTAAAGAGCACT
AGACAAACACTTGTCTATATTATTTTAAAATCCTCTTCCTGTGTCAAACC
AGATCAGTCTTTACTAATGGATGTAGTTGTTCCTCTTGCTTTACTCTATT
AAAGGCATGTGTGTGTGGGGGAACCAGTGTTGAATCTTCCCATACTAGAT
ATAATATCATCTGATTTGCAGAGTGGTCGTGCATAGAACATTGTTCTATT
TAACATTTTTAACAACTGTGGGAGGCGTTTTTTGCCCGCGCTTTACTAAT
AGAATAGCTAAAGATCATATGAGCTAGACTCGACTTTAACCATTTGACTA
TTAATGGTAAGTTGGGATGAACCTCCAGTTGTCCG

CCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTTACCTGAGGAATACCGAATGG
CTGAGAAGCACCTGAAAAAATGTTCAACATCCTTTATCATCAGGTAAATA
CAAATCAAAACAACCCTGAGATTCCACCTGAGACCAGCCAGAAATAGCTA
AGATCAAAAACTCAGGTGACAGCAGATGTTGGCGAGGATGTGGAGAAAGA
GGAACACTCCTCCATTGCTGGTGAGATTGCAAGCTTGTAAAACCACTCTG
TAAATCAGTTTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGG
ATCCCGCAATACCTTTCCTGGGGATATATCCAGAAGATGTTCCAACTGGT
AAGAAGGACACATGCTCCACTATTTTCATAGCAGCCTTTTTTATAATAGC
CAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAAA
AAATGTGGTACATTTACACAATGGAGTACTACTCAGCTATTAAAAAGAAT
GAATTTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGTATTATCTG
GAACGAGGTAATCCAATCACAAAAGAAGTCACCCCTTTTTGTACTCACTG
ATAAGTGATATTAGCCCAGATACTTAGACTTACCCAGGTTATTGATACCA
TTTCCTAAACGGCTGAAACTTCTGAAGAACGTAAACCAAATGGTG

Query= MSMg01no349_c04.b1 MSMg01no349_c04.b1 CHROMAT_FILE:
MSMg01no349_c04.b1 PHD_FILE: MSMg01no349_c04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:40:39 2005
         (555 letters)



>mm_chr9_87584750_87585704
          Length = 955

 Score = 1027 bits (531), Expect = 0.0
 Identities = 546/551 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcctattatatttagaatgtgaagtatcctctcaaacaactcatgtttcggagacc 64
           |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 755 gaattcctattatagttagaacgtgaagtatcctctcaaacaactcatgtttcggagacc 696

                                                                       
Query: 65  tggtcccagcttgtgataccaaacactgagaggtgcttaggttgtgacaggttaatctac 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 tggtcccagcttgtgataccaaacactgagaggtgcttaggttgtgacaggttaatctac 636

                                                                       
Query: 125 tggtagagtcataacaatgtgactttggatgatagtggaagttggagatagatcttagat 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 635 tggtagagtcataacaatgtgactttggatgatagtggaagttggagataggtcttagat 576

                                                                       
Query: 185 ggaagaagtagattctcagagtttatgctcaaatgatatagtgtgtcaaagaatcttctg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 ggaagaagtagattctcagagtttatgctcaaatgatatagtgtgtcaaagaatcttctg 516

                                                                       
Query: 245 tggttctacatctctggattacattcctgatgtcagggcctgcctcctctgctaagaaca 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 tggttctacatctctggattacattcctgatgtcagggcctgcctcctctgctaagaaca 456

                                                                       
Query: 305 cgtccccattgaattcctttctccccagcccatgctcattcaccttaaagagcactagac 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cgtccccattgaattcctttctccccagcccatgctcattcaccttaaagagcactagac 396

                                                                       
Query: 365 aaacacttgtctatattattttaaaatcctcttcctgtgtcaaaccagatcagtctttac 424
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 395 aaacacttgtctatattattttaaaatcttcttcctgtgtcaaaccagatcagtctttac 336

                                                                       
Query: 425 taatggatgtagttgttcctcttgctttactctattaaaggcatgtgtgtgtgggggaac 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 taatggatgtagttgttcctcttgctttactctattaaaggcatgtgtgtgtgggggaac 276

                                                                       
Query: 485 cagtgttgaatcttcccatactagatataatatcatctgatttgcagagtggtcgtgcat 544
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 275 cagtgttgaatcttcccatactagatataatagcatctgatttgcagagtggtcgtgcat 216

                      
Query: 545 agaacattgtt 555
           |||||||||||
Sbjct: 215 agaacattgtt 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 955
Length adjustment: 10
Effective length of query: 545
Effective length of database: 945
Effective search space:   515025
Effective search space used:   515025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)