Query= MSMg01no350_f19.b1 MSMg01no350_f19.b1 CHROMAT_FILE:
MSMg01no350_f19.b1 PHD_FILE: MSMg01no350_f19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:42:16 2005
(465 letters)
>mm_chr9_94877898_94878763
Length = 866
Score = 839 bits (434), Expect = 0.0
Identities = 455/462 (98%), Gaps = 1/462 (0%)
Strand = Plus / Minus
Query: 5 gaattcagctgccttctataaatcagacatttgtagatttgcaaaaatttaaacaggaag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 gaattcagctgccttctataaatcagacatttgtagatttgcaaaaatttaaacaggaag 703
Query: 65 tgttgcctatgttaacatgtaatattttcattattatcattttgaaataaattagctaaa 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 702 tgttgcctatgttaacatgtaatattttcattattatcattttgaaataaattacctaaa 643
Query: 125 aattttaaatcctcatttaaactttctaatatgggaagattgatcactgtaattattcct 184
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 atttttaaatcctcatttaaactttctaatatgggaagattgatcactgtaattattcct 583
Query: 185 attctggtaaatgtttaacagttggccctttgggaggagtgggagagagctgatg-gtgg 243
||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 582 attatggtaaatgtttaacagttggccctttgggaggagtgggagagagctgatgtgtgg 523
Query: 244 tgtcagctgattgcacagtgtgaattcacccatgatgtcttcaggttgttgctaaacctg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 tgtcagctgattgcacagtgtgaattcacccatgatgtcttcaggttgttgctaaacctg 463
Query: 304 aggtgggagttaatttcagctagctcccctgaacatggttcacaaaatcaaagttctttg 363
|| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 agttgggagttaattccagctagctcccctgaacatggttcacaaaatcaaagttctttg 403
Query: 364 gtaaaacctcaataatttctaagtctgtaaagaagccttgttcataaaagattatgaact 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 gtaaaacctcaataatttctaagtctgtaaagaagccttgttcataaaagattatgaact 343
Query: 424 gcctatggtactgacagatcccctttaatctcagccctcagg 465
||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 342 gcctatggtactggcagatcccctttaatctcagccctcagg 301
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 866
Length adjustment: 10
Effective length of query: 455
Effective length of database: 856
Effective search space: 389480
Effective search space used: 389480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no350_f19.g1 MSMg01no350_f19.g1 CHROMAT_FILE:
MSMg01no350_f19.g1 PHD_FILE: MSMg01no350_f19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:42:16 2005
(425 letters)
>mm_chr9_94703704_94704529
Length = 826
Score = 808 bits (418), Expect = 0.0
Identities = 424/426 (99%), Gaps = 1/426 (0%)
Strand = Plus / Plus
Query: 1 cacatagttccctacttcttgtgctcaggtaaccatgtgatctttaggggattaatgcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacatagttccctacttcttgtgctcaggtaaccatgtgatctttaggggattaatgcaa 260
Query: 61 ataatccacacttcccttccttagccattacaaattcaatgcaaaaatctgcctttcttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ataatccacacttcccttccttagccattacaaattcaatgcaaaaatctgcctttcttt 320
Query: 121 gtgttatagacacagcttggtgatggttattttctaataaaacgcaaaagagagaatttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgttatagacacagcttggtgatggttattttctaataaaacgcaaaagagagaatttt 380
Query: 181 tttt-aagataccaagatgaaaaggacgtgttttgaaattatccaagcaactgaatgttc 239
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttttaagataccaagatgaaaaggacgtgttttgaaattatccaagcaactgaatgttc 440
Query: 240 tggaactttttgttttgaaaccttctctcagcatgcctttaggtatacaagttagagact 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tggaactttttgttttgaaaccttctctcagcatgcctttaggtatacaagttagagact 500
Query: 300 atgagacaagctgaagaaatttcaaatcagtaaatgcttcatgaacacccaggaaagtga 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgagacaagctgaagaaatttcaaatcagtaaatgcttcatgaacacccaggaaagtga 560
Query: 360 gaacattgagcatttccccaaattctcttgcccagtgcccttcactcaagtgaatgacat 419
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaacattgagcaattccccaaattctcttgcccagtgcccttcactcaagtgaatgacat 620
Query: 420 actgcc 425
||||||
Sbjct: 621 actgcc 626
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 425
Length of database: 826
Length adjustment: 9
Effective length of query: 416
Effective length of database: 817
Effective search space: 339872
Effective search space used: 339872
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|