NNNNCCCTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCCAAGGTTGCCGGTCTAATACCTAGAACAGTGGAGCCC
AAATAGGACTCATTGGTATTTCTTAGATGGTGATGAAACCATCACCGTTG
TCCTTTGCTCTGAGTGATGCTGAGACAGGAAGCTTGAGCCTGTTTTGTTT
TCTCTTGTTCTCTTTATGGCCTGGGGCCTGAGCCAGAGCTTTGGTTTGTA
CTAGGCAGAGTAGTGCTCTCTACCACTGAGCTGCATCCCAGCCCTTAATC
TGGTTTTTGTTTTTGTTTTGGTCTTGTTTCCCCGCCTCCTTTGAGACAGG
GTTTCTCCGTGTAGTTCTGGCTGTCCTGGAACTTGCTATGTAGGCCAGGC
TGTCCTGGAACTTACAGAGATCCTCCCTGCTTCTGCCTCCTGAGTGCTGA
AATTAAAGGTGTGTGCCACTACTGCCTGATATTTAATCTGTACTTTATTA
AGCTCTTAGAATGTCTGTTTTCTGACAAGTTAAGGAAATTCTATTCTGCT
ATCACATCTGAATTTTTTACAGCTGGCATTCAGGCTTTAATTGATCAAAA
TATTTCCGAGTTGTCCCATTATCCTGTATCTACCCTTTTGCGTTGCTTGT
TGCTACGCCCAAAACATTAAATCTTCCACCACTCTAAGAACTTCCCCATT
CCTTTCCTAACACAACACCTTAATTATACATTTGGTTCCCTCCTN

NNNNCCCCAATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCCGGCCCGCCAGGAGGGAG
GCTCCGCCTCCGGATCGATCGATCCATCCATCCATCCATCCATCGATGCC
TCNCNCCCCCCCCCCCCCNCCCCCCCCCCCCCCTCNCCNNNCNCCCNCCC
CCCNCCCCCCCCCCCCCCCCCCCCCCCCCCCNNCNNNCCCCCCCCCCCCC
CCTCTTCCTCTTCTCCCCCCCCCTCCTCCCTCCCCCCCCCCCCCCCCCCC
CCCTCCCCCCTTCTTCCCTCTCTCCCCCCCCCCCCCCTCCCCCCCCCNTC
CTCCCCCCCTCTTCCCCCCCCCCCCCCCCCTCCCCCTCTCCTCCCCCCCC
CCCCTCCTTTCCCCCCCCCCCCCCCCCCCCCCTCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCTCCCCTTCCCCCCCCCCCCCCCCCCTCCCTTCTCCCCC
CCCCCCCCCCCTCCCCCCCCCCCCCCCCCCCTCCCCTCCCTCCCCCCTCT
CCTCTTTCCCTCCCCCCCCCCCCCCCCCCCCCCCCTCCCCCCCCTCCCCC
TCTCCCCCCCCCCCCCTCCCCCCCCCCCCCTTTTTTCCCTCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTTCCCCCCCCCCCCTC
CTTCCCCCCCCCCCTTCCTCCCCCCCCCCCCCCCCCCCCTCCCCCTCCCC
CCCCCTTCCCCTTCCCCCCCCCCCCTCCCCCCTCCCCCCTCCTCCCN

Query= MSMg01no350_g13.b1 MSMg01no350_g13.b1 CHROMAT_FILE:
MSMg01no350_g13.b1 PHD_FILE: MSMg01no350_g13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:42:19 2005
         (494 letters)



>mm_chr9_79979194_79980087
          Length = 894

 Score =  940 bits (486), Expect = 0.0
 Identities = 492/494 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtctaatacctagaacagtggagcccaaataggactcattggtatttcttagatggtgat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtctaatacctagaacagtggagcccaaataggactcattggtatttcttagatggtgat 260

                                                                       
Query: 61  gaaaccatcaccgttgtcctttgctctgagtgatgctgagacaggaagcttgagcctgtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaaccatcaccgttgtcctttgctctgagtgatgctgagacaggaagcttgagcctgtt 320

                                                                       
Query: 121 ttgttttctcttgttctctttatggcctggggcctgagccagagctttggtttgtactag 180
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgttttctcttgttctctttatgtcctggggcctgagccagagctttggtttgtactag 380

                                                                       
Query: 181 gcagagtagtgctctctaccactgagctgcatcccagcccttaatctggtttttgttttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcagagtagtgctctctaccactgagctgcatcccagcccttaatctggtttttgttttt 440

                                                                       
Query: 241 gttttggtcttgtttccccgcctcctttgagacagggtttctccgtgtagttctggctgt 300
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gttttggtcttggttccccgcctcctttgagacagggtttctccgtgtagttctggctgt 500

                                                                       
Query: 301 cctggaacttgctatgtaggccaggctgtcctggaacttacagagatcctccctgcttct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cctggaacttgctatgtaggccaggctgtcctggaacttacagagatcctccctgcttct 560

                                                                       
Query: 361 gcctcctgagtgctgaaattaaaggtgtgtgccactactgcctgatatttaatctgtact 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcctcctgagtgctgaaattaaaggtgtgtgccactactgcctgatatttaatctgtact 620

                                                                       
Query: 421 ttattaagctcttagaatgtctgttttctgacaagttaaggaaattctattctgctatca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttattaagctcttagaatgtctgttttctgacaagttaaggaaattctattctgctatca 680

                         
Query: 481 catctgaatttttt 494
           ||||||||||||||
Sbjct: 681 catctgaatttttt 694


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 894
Length adjustment: 10
Effective length of query: 484
Effective length of database: 884
Effective search space:   427856
Effective search space used:   427856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)