NGGTCTATATTTGCGGCGCTAAACGACTACTATATCCAGAAATCCGCGGA
ATTCTTTCAGGTTCCCAGAAATGTTCCTTGCCATGTATTTGAATTAACCA
GGCCCAGAGGATGAAACTTTCGAATTAAACACATTCCTTAAGGATTCCAG
GCTCATTGTGTATGCACCAAGGAAACACAACACATCCTAAAAATAATACA
CACAGAGAGAAGCGCATTTCCCACCAACATTAAAGTAGAATATGAGTTAT
GACCCAGCTCATGGGAATAGACGTTTGATTACATGCAAAACGGAGCTTTC
GTAAATAGCATCCGTCTTGGTGTTCTACCACAATCATTACCGACCATTTA
ATTTTACTCCCTAGCAACCCATCCATCATGGTTAGAAACCATTCACTCTC
AGGCTCCCCTCCCCCAGCCCACCTTAGGATCGAGGAGGCACCAGATTTTA
TCAGGTTCGTTGTTCCAGTGATGGAGATGACTAGCCCAGCAGCCAAGGAG
TTCATGAGATTATTAGATTTGCCAAAGTGGATGTTTCTTTCAACATGGCA
TTCTGGAGAACTGCTAGAAGAGGAGTTACTATGGCGGGTGTTCTGTTTGC
TCTCTGTACAGAGGATTTATGAAACTATGTTTTGGCCTTGGGGACATGGG
TTTCTTGCAGTTAAAAGGGTCCACAAATTACTTGCCCTTTCCCGAGGCCC
TTGGACCTAAAATATGAAATCCTGGCCGAAAAAACCCTTGAAGACCTGGG
TCGGATTCCTTGTT

NNNCCTATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTGTGATTTCCCCATTGGG
ACATGCCAATTAAAAGCCTAAGTGGGTAGGTTCCTGTGACTGTGTCCCTT
AGTCACAGGGTCCTGGCTTTGCTGGTGGGGTCTGTGTATTGGAGTGAACA
TGGTTCCAGTACCTAGGCTGGTGTCTCTAGGGAGGTCTTAAAAACTTTCC
TATCTGTGTATACTCTGGGTTGCTGTCTCCAGGGCTTCCATCTCTAAGGT
CTATGGAACCTAGAAGTTCTGGGTCACTATACCCAGGAGCACTGAGAAGA
CTCTCACCTGCATTCACACTAGGGATTTTCTTTGACAGCATGGTCAACTC
TGCCCCCTGCTAATCAGGCGCCCCAGAAAGACCTTATCTGGAGAACAGAT
TTTCATGTAGTTTAGAACACATTTAACTTTCATAGATAGAATGCCTGCTC
TCATGACCACATTGTTTGAAGAAAATCTGCTTTATAAACAACTGCACAGT
ATCTTGTATCTGAAATCCAAAATGTTGATTTTTAAACTCCCTGGAGGAAG
TAAACTCCTAAGTAGGGTTCTTCCCTGTCTGGCCCTCGGCACTAAGAAAA
TTATTTTGTGGCCAAATTTTCCGCCTCTCTTCCTTGAAACAACTCTTCTT
TCCCTGTGCCCTCTAAATTCTTTTTCCACAATTCTTCTTCATTTCCCTCT
CTTTTCTCTCTTTTCTG

Query= MSMg01no350_k19.b1 MSMg01no350_k19.b1 CHROMAT_FILE:
MSMg01no350_k19.b1 PHD_FILE: MSMg01no350_k19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:42:40 2005
         (496 letters)



>mm_chr9_68707416_68708311
          Length = 896

 Score =  944 bits (488), Expect = 0.0
 Identities = 494/496 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgttccttgccatgtatttgaattaaccaggcccagaggatgaaactttcgaattaaac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 atgttccttgccatgtatttgaattaaccaggcccagaggatgaaactttcgaattaaac 637

                                                                       
Query: 61  acattccttaaggattccaggctcattgtgtatgcaccaaggaaacacaacacatcctaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 acattccttaaggattccaggctcattgtgtatgcaccaaggaaacacaacacatcctaa 577

                                                                       
Query: 121 aaataatacacacagagagaagcgcatttcccaccaacattaaagtagaatatgagttat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 aaataatacacacagagagaagcgcatttcccaccaacattaaagtagaatatgagttat 517

                                                                       
Query: 181 gacccagctcatgggaatagacgtttgattacatgcaaaacggagctttcgtaaatagca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gacccagctcatgggaatagacgtttgattacatgcaaaacggagctttcgtaaatagca 457

                                                                       
Query: 241 tccgtcttggtgttctaccacaatcattaccgaccatttaattttactccctagcaaccc 300
           ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 tccgtcttggtgagctaccacaatcattaccgaccatttaattttactccctagcaaccc 397

                                                                       
Query: 301 atccatcatggttagaaaccattcactctcaggctcccctcccccagcccaccttaggat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 atccatcatggttagaaaccattcactctcaggctcccctcccccagcccaccttaggat 337

                                                                       
Query: 361 cgaggaggcaccagattttatcaggttcgttgttccagtgatggagatgactagcccagc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 cgaggaggcaccagattttatcaggttcgttgttccagtgatggagatgactagcccagc 277

                                                                       
Query: 421 agccaaggagttcatgagattattagatttgccaaagtggatgtttctttcaacatggca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 agccaaggagttcatgagattattagatttgccaaagtggatgtttctttcaacatggca 217

                           
Query: 481 ttctggagaactgcta 496
           ||||||||||||||||
Sbjct: 216 ttctggagaactgcta 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 496
Length of database: 896
Length adjustment: 10
Effective length of query: 486
Effective length of database: 886
Effective search space:   430596
Effective search space used:   430596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no350_k19.g1 MSMg01no350_k19.g1 CHROMAT_FILE:
MSMg01no350_k19.g1 PHD_FILE: MSMg01no350_k19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:42:41 2005
         (420 letters)



>mm_chr9_68517319_68518138
          Length = 820

 Score =  812 bits (420), Expect = 0.0
 Identities = 420/420 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   agtgtgatttccccattgggacatgccaattaaaagcctaagtgggtaggttcctgtgac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtgtgatttccccattgggacatgccaattaaaagcctaagtgggtaggttcctgtgac 260

                                                                       
Query: 61  tgtgtcccttagtcacagggtcctggctttgctggtggggtctgtgtattggagtgaaca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtgtcccttagtcacagggtcctggctttgctggtggggtctgtgtattggagtgaaca 320

                                                                       
Query: 121 tggttccagtacctaggctggtgtctctagggaggtcttaaaaactttcctatctgtgta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggttccagtacctaggctggtgtctctagggaggtcttaaaaactttcctatctgtgta 380

                                                                       
Query: 181 tactctgggttgctgtctccagggcttccatctctaaggtctatggaacctagaagttct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tactctgggttgctgtctccagggcttccatctctaaggtctatggaacctagaagttct 440

                                                                       
Query: 241 gggtcactatacccaggagcactgagaagactctcacctgcattcacactagggattttc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggtcactatacccaggagcactgagaagactctcacctgcattcacactagggattttc 500

                                                                       
Query: 301 tttgacagcatggtcaactctgccccctgctaatcaggcgccccagaaagaccttatctg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttgacagcatggtcaactctgccccctgctaatcaggcgccccagaaagaccttatctg 560

                                                                       
Query: 361 gagaacagattttcatgtagtttagaacacatttaactttcatagatagaatgcctgctc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gagaacagattttcatgtagtttagaacacatttaactttcatagatagaatgcctgctc 620


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 820
Length adjustment: 9
Effective length of query: 411
Effective length of database: 811
Effective search space:   333321
Effective search space used:   333321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)