AAACCCCTTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCTGCTTGGGATTTCATTGATTCTGTGGGACAGTTGGGT
GAAGAACTTGCACCTTAGTTTTATTTCAATGTGAAATCCATGAGCATAGT
ATGTTTCTCCTATGTGGGTCCAGAAGTTCTGCCATGACATGACAGCTTTA
CGGGTGAGGACACTGACCTGGATATAATTCTGGTAGTTCTGTGTTATTTC
ATTCTTTTGCTGAATAACATTTTTTTTTCATTTTGTAAGTTTCTATCCTG
CTGGTTTTATAGTATGGACCTTATACTTGGCTCCATATTAGACTGTTTCT
TTAAAATAGTATATATAGTCTACTGTGCTTCCTCCTGAGAAGACAGAACA
AGTAAGCAGTGGCCATCTAAAGCACTTAGCTTCTCATTTTTCATTGCTCT
AGAAAAACAGTTAAAATAGGTGAGAATAGTAGTATTTGTGTCCACTTTCC
AATCCCAAAGGGGAAATATCAATTCCCAGCCACCATTAGATGTAATTTTC
TAATTTTATCTATGCTAATCATTAGATTAAGGGAGTTTTCTTCTGTTTTC
AGATTAGAAAAAGACTCTCTAAGGCTTATTGTTGTTATTGATCGTGAAAC
ACCGNGAACTTATAAAATGTTTCTTCTAAACTTAAAGTAACCATGATCCC
CTTCCTTTGGTTTAATAACTGAATAAN

NCCCCTTTTNCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCACATAAAACCAGA
TACACTGAAACTTATAGAGGAGAAAGTGGGAAAAAGCCTCGAAGATATGG
GCACAGAGGAAAAATTCCTGAGCAGAACAGCAATGGCTTGTGCTGTAAGA
TCAAGAATCGACAAATGGATATTAGTCCCCTATCAGATTTAGGATTGATA
AAAATCCTTTCCCAATCTCTTGGTGGCCTTTTTGTCTTATTGACAGTGTC
TTTTGCCTTACAGAAGCTTTGCAATTTTATGATGTCCCATTCGTCAATTC
TTGATCTTACAGCACAAGCCATTGATGTTCTGTTTAGGAATTTTTCCCAT
GTAACTATATCAGGCCCCCAATGGAGAAGCTAGAGAAAGCACCCAAGGAG
CTGAAGGGGTCTGCAACCCTATAGGTGGAACAACAATATGAACTAACCAG
TACCCCCAGAGCTCGTGTCTCTAGCTGCATATGTAGCAGAAGATGGCCTA
GTCGGTCATCATTGGAAACAGAGGCCCCTTGTTATTGCAAACTTTATATG
CCCCAGTATCAGGGGAACACCAGGGCCAAAAAATGGGTATTGTGTGTGTT
AGTGAATCATACTCTCCTCCCTACTTATCATTTATTTTCTCTCCCTACTC
TTCTTCCCTTTCTACGTCTATTTTTCATTTCCCTTCTTTTCTTTCTCCCT
TCC

Query= MSMg01no351_b09.b1 MSMg01no351_b09.b1 CHROMAT_FILE:
MSMg01no351_b09.b1 PHD_FILE: MSMg01no351_b09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:15 2005
         (525 letters)



>mm_chr9_24634745_24635671
          Length = 927

 Score =  917 bits (474), Expect = 0.0
 Identities = 511/526 (97%), Gaps = 6/526 (1%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattctgcttgggatttcattgattctgtgggacagttgggtgaagaacttgcacctt 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 843 ggaattctgcttgggatttcattgattctgtgggacagttgggtgaagaacttgcacctt 784

                                                                       
Query: 64  agttttatttcaatgtgaaatccatgagcatagtatgtttctcctatgtgggtccagaag 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 783 agttttatttcaatgtgaaatccatgagcatagtatgtttctcctatgtgggtcctgaag 724

                                                                       
Query: 124 ttctgccatgacatgacagctttacgggtgaggacactgacctggatataattctggtag 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 ttctgccatgacatgacagctttacgggtgaggacactgacctggatataattctggtag 664

                                                                       
Query: 184 ttctgtgttatttcattcttttgctgaataacatttttttttcattttgtaagtttctat 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 ttctgtgttatttcattcttttgctgaataacatttttttttcattttgtaagtttctat 604

                                                                       
Query: 244 cctgctggttttatagtatggaccttatacttggctccatattagactgtttctttaaaa 303
           ||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||
Sbjct: 603 cctgctggttttatagtatggacattatacttggctccatattagact--ttctttaaaa 546

                                                                       
Query: 304 tagtatatat----agtctactgtgcttcctcctgagaagacagaacaagtaagcagtgg 359
           |||| |||||    |||||| ||||||||||||||||||||||||||||||||||||  |
Sbjct: 545 tagtttatatgcagagtctattgtgcttcctcctgagaagacagaacaagtaagcagcag 486

                                                                       
Query: 360 ccatctaaagcacttagcttctcatttttcattgctctagaaaaacagttaaaataggtg 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ccatctaaagcacttagcttctcatttttcattgctctagaaaaacagttaaaataggtg 426

                                                                       
Query: 420 agaatagtagtatttgtgtccactttccaatcccaaaggggaaatatcaattcccagcca 479
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||
Sbjct: 425 agaatagtagtatttgtgtccactgtccaatcccaaaggggaaatatcaattcccggtca 366

                                                         
Query: 480 ccattagatgtaattttctaattttatctatgctaatcattagatt 525
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ccattagatgtaattttctaattttatctatgctaatcattagatt 320


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 927
Length adjustment: 10
Effective length of query: 515
Effective length of database: 917
Effective search space:   472255
Effective search space used:   472255
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)