Query= MSMg01no351_d24.b1 MSMg01no351_d24.b1 CHROMAT_FILE:
MSMg01no351_d24.b1 PHD_FILE: MSMg01no351_d24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:27 2005
(501 letters)
>mm_chr9_34478155_34479054
Length = 900
Score = 909 bits (470), Expect = 0.0
Identities = 488/494 (98%), Gaps = 3/494 (0%)
Strand = Plus / Minus
Query: 9 tcatttcccttgggtgctgactgcctaggggttcttctctttaccatggccctacttcaa 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 700 tcatttcccttgggtgctgactgcctaggggttcttctctttaccatggccctac-tcaa 642
Query: 69 tgggagaagtgagccaaggactacctgtatcccacaggggagtgggctgtggctgtgcca 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 tgggagaagtgagccaaggactacctgtatcccacaggggagtgggctgtggctgtgcca 582
Query: 129 aatgggagcagaag-caggggaaggcatggaagcagaatttgggtaagagcagcctagca 187
|||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 581 aatgggagcagaagcca-gggaaggcatggaagcagaatttgtgtaagagcagcctagca 523
Query: 188 acagacgttcccactgtcagatcatctctcacatggagctgggaaaggaggaggaactgt 247
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 522 acagacgttcccactgtcagctcatctctcacatggagctgggaaaggaggaggaactgt 463
Query: 248 attccctgggtgcttcctaaatggatattgcagcgttagctaattgattccctcattcat 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 attccctgggtgcttcctaaatggatattgcagcgttagctaattgattccctcattcat 403
Query: 308 taatcctgaaatgctggaagtgtaaaaatcaagtgccagccatgatggcaggtgctatgt 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 taatcctgaaatgctggaagtgtaaaaatcaagtgccagccatgatggcaggtgctatgt 343
Query: 368 agagtggcaagacccagaggggcacacctggccccccgaggagcccagtctgaggtgtcc 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 agagtggcaagacccagaggggcacacctggccccccgaggagcccagtctgaggtgtcc 283
Query: 428 aagctgaaacattcgctgaaacacagcctgtgttcccacaagctcatccttcatgggacc 487
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 aagctgaaacgttcgctgaaacacagcctgtgttcccacaagctcatccttcatgggacc 223
Query: 488 ttgcatgaatctgt 501
||||||||||||||
Sbjct: 222 ttgcatgaatctgt 209
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 501
Length of database: 900
Length adjustment: 10
Effective length of query: 491
Effective length of database: 890
Effective search space: 436990
Effective search space used: 436990
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no351_d24.g1 MSMg01no351_d24.g1 CHROMAT_FILE:
MSMg01no351_d24.g1 PHD_FILE: MSMg01no351_d24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:27 2005
(405 letters)
>mm_chr9_34449493_34450298
Length = 806
Score = 723 bits (374), Expect = 0.0
Identities = 398/406 (98%), Gaps = 2/406 (0%)
Strand = Plus / Plus
Query: 1 caggccaccctgggctacagggtgagacatcttttccaaaaaaaaaaaaaaaaaaaaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 caggccaccctgggctacagggtgagacatcttttccaaaaaaaaaaaaaaaaaaaaagg 261
Query: 61 aaaggaaagaaagagagagagagagagagagagagagagagagagagagagagagagaga 120
|||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aaag-aaagaaagaaagaaagagagagagagagagagagagagagagagagagagagaga 320
Query: 121 aacaagcaaacaatttaaatcaaccccattctaattttt-ggccatgtgaactttggtga 179
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 aacaagcaaacaatttaaatcaaccccattctaattttttggccatgtgaactttggtga 380
Query: 180 tgtctgctccctgcctgttacttgcaggtcaagagctggatctcaaggccctccagcgtg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtctgctccctgcctgttacttgcaggtcaagagctggatctcaaggccctccagcgtg 440
Query: 240 gccctggaattcgagggtagacagcacccattcaccgtgtaaatcctgtattactgaagg 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 441 gccctggaattcgagggtagacagcacccattcaccgtgtaaatcctgtattactgcggg 500
Query: 300 gggtataagggtggcacgtatttatctcaggtggcataaatatttacatcgtagaaaaac 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gggtataagggtggcacgtatttatctcaggtggcataaatatttacatcgtagaaaaac 560
Query: 360 agaagaatgactaggaaacaaactttctcctgaacgcttctgtgtt 405
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agaagaatgactaggaaacaaactttctcctgaacgcttctgtgtt 606
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 19
Number of successful extensions: 19
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 1
Length of query: 405
Length of database: 806
Length adjustment: 9
Effective length of query: 396
Effective length of database: 797
Effective search space: 315612
Effective search space used: 315612
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
