Query= MSMg01no351_p16.b1 MSMg01no351_p16.b1 CHROMAT_FILE:
MSMg01no351_p16.b1 PHD_FILE: MSMg01no351_p16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:21 2005
(469 letters)
>mm_chr9_71203316_71204184
Length = 869
Score = 878 bits (454), Expect = 0.0
Identities = 463/466 (99%)
Strand = Plus / Plus
Query: 4 ggaattctcagttcctaacaaccaacaattgatcatctagggcagatggacaatgagaac 63
||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 204 ggaattctcagttccaaacaaccaacaattgatcatctagggcagatggacaatgggaac 263
Query: 64 tgttgtattgtgcaactccaagttctgctcaatgtggtaacgttataacgttcccctccc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgttgtattgtgcaactccaagttctgctcaatgtggtaacgttataacgttcccctccc 323
Query: 124 agttcagacccaataaagactcagaagacagacaggcaaaataccatatgctcacgcaga 183
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 324 agttcagacccaataaagactcagaagacaggcaggcaaaataccatatgctcacgcaga 383
Query: 184 tgagctcattagaagttactgctttagattcatggacaaagggtttgttcacacttctct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgagctcattagaagttactgctttagattcatggacaaagggtttgttcacacttctct 443
Query: 244 gggttagacaattaaccacctacccacaggcatccttcttcacacaaagattctggcata 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gggttagacaattaaccacctacccacaggcatccttcttcacacaaagattctggcata 503
Query: 304 cgtactgaaagacatgtgttctgctggcatgcaggcagacccgatgaccagaattaaaaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cgtactgaaagacatgtgttctgctggcatgcaggcagacccgatgaccagaattaaaaa 563
Query: 364 ggggatgatctcacacttgtgttttcttctaacccactcctcagataacccttccctaac 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ggggatgatctcacacttgtgttttcttctaacccactcctcagataacccttccctaac 623
Query: 424 acatgccaagccaggagtcactcccacccagtgactcacacaccta 469
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 acatgccaagccaggagtcactcccacccagtgactcacacaccta 669
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 869
Length adjustment: 10
Effective length of query: 459
Effective length of database: 859
Effective search space: 394281
Effective search space used: 394281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no351_p16.g1 MSMg01no351_p16.g1 CHROMAT_FILE:
MSMg01no351_p16.g1 PHD_FILE: MSMg01no351_p16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:21 2005
(411 letters)
>mm_chr9_71331468_71332279
Length = 812
Score = 766 bits (396), Expect = 0.0
Identities = 408/412 (99%), Gaps = 1/412 (0%)
Strand = Plus / Minus
Query: 1 actttgtagaccaggctggcctcgaactcataaatccgcctgcctttgcctcccaagtgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 actttgtagaccaggctggcctcgaactcataaatccgcctgcctttgcctcccaagtgc 473
Query: 61 tgggatcaaaggcgtgcgccaccacgccctgctcatagtttggg-tttgactacacctca 119
|||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 472 tgggattaaaggcgtgcgccaccacgccctgctcatagtttgggttttgactacacctca 413
Query: 120 tcatcctgtggtcaggtgtgaaactttccaccctgagagaatttcatttcccattcaaag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 412 tcatcctgtggtcaggtgtgaaactttccaccctgagagaatttcatttcccattcagag 353
Query: 180 cactcccttgggggaggggttagaataattttacgtgtttggttattgtcttaagccaga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 cactcccttgggggaggggttagaataattttacgtgtttggttattgtcttaagccaga 293
Query: 240 ttttttaaaaatcaaaaaaaaatttttttaaacttttaagagccagcttttctttgattc 299
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 292 ttttttaaaaatcaaaaaaaattttttttaaacttttaagagccagcttttctttgattc 233
Query: 300 cattttgccttttaaatactgtgttccccatgtttaaaaacatgcctgtaatatgtatgt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 cattttgccttttaaatactgtgttccccatgtttaaaaacatgcctgtaatatgtatgt 173
Query: 360 gctggtttctttttttccactccacagaaaattcatttgcaaattgcccgac 411
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 gctggtttctttttttccactccacagaaaattcatttgcaaattgcccgac 121
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 812
Length adjustment: 9
Effective length of query: 402
Effective length of database: 803
Effective search space: 322806
Effective search space used: 322806
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
