ACAACTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCCTGATCTTTCCAGACTTTTATCATGAATGGGTGTTGGATTT
TGTCAAATGCTTTCTCAGCATCTAACGAGATGATCATGTGGTTTTTGTCT
TTGAGTTTGTTTATATACTGGATTACATTGATGGATTTCCGTATATTGAA
CCATCCCTGCATCCCTGGGATGAAACCTACTTGGTCAGGATGGATGATTG
TTTTGATGTGTTCTTGGATTCAGTTAGCAAGAACTTTATTGAGGATTTTT
GCATCGATATTCATAAGGGAAATTGGTCTGAAGTTCTCTATCTTTGTTGG
GTCTTTTTGTGGTTTAGGTATCAGAGTAATTGTGGCTTCATAGAATGAGT
TGGGTAGAGTACCTTCCGTTTCTATTTTGTGGAATAGTTTGTGAAGAACT
GGAATTAGGTCTTCTTTGAAGGTCTGATAGAACTCTGCACTAAACCCGTC
TGGTCCTGGGCTTTTTTTGGCTGGGAGACTATTAATAACTGCTTCTATTT
CTTTAGGGGATATAGGACTGTTGAGATCATTAACCTGATCTTGATTTAGC
TTGTCTAGAAACTTGCCCATTTCATCCAGGTTTTCTAGTTTTGTTGAGCA
TAACCCCTTTGTACAATGACCCGAAGCCGCTTTTGAATTTTTTCCTCGAA
CTGCTCGTAATGTCCCCCCTTTCTTTTCCTGAATTCTGGCAATATCCACG
TTTTTCTTCCCGCCCTCCN

NNNCCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXCTGTCTTGTGGCTACGAGGACAC
CTATACCTATATCCACTGAAAGGAGAAACACTTCCTGGTTTGAACTGCAC
TTAGTGGGACCAGCTTAGGGGGGCAGTGCTGCTAAGATGCATGACTTTCT
TCTTCAAACTCCTCCAGGCACACAGAGCTGATCTGTACAATCTTGCCTGG
ACTTCATTTCTTAAAAAGTACGTTTTAGCATTGCAGGGATAAGAATGGTA
CCCTAGCCTGATTTGATGGCTGTATTTTGCAAAGAGGCTTCAGATCCAAG
CTCTCATCTGATTTCTGCATCTCTTTTTACAGGTGGAGAATTAAGAGTTT
TAGAGAAATGTGTCTGCCCAGGAGTCATCTTTAGTGCTAGCGTTCAGTTT
GAAACTCAGATCTATGGAATGCCTAAGCCCAGTTCTTTCCCGGCCCCAGG
AGTTCAGAAGGTTCCATTGAAATTGCCCAGCCCCAGGAGCCAGCATCATA
ACGCAAGGGGAGGGCTGCGTTTTTTTGAGAAGTTCTGGAAACACACAGGG
TCAGTGGATTTTAACTCAGCTAGTTCACATCTCCTCCCCCCGCCTTCACA
CTGTGGTCCCAGCTCCTCCAAAAACAGGTGGAAATCCCCCCCGCTTGTGA
AACCTTCGGGACACTTCTCCTCCCTTGCTTAACGGGTGTTGAAACTAATT
GCCTTCTAAGTCCGCG

Query= MSMg01no353_c09.g1 MSMg01no353_c09.g1 CHROMAT_FILE:
MSMg01no353_c09.g1 PHD_FILE: MSMg01no353_c09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:56 2005
         (504 letters)



>mm_chr9_27632290_27633192
          Length = 903

 Score =  903 bits (467), Expect = 0.0
 Identities = 485/491 (98%), Gaps = 2/491 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctgtcttgtggctacgaggacacctatacctatatccactgaaaggagaaacacttcctg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ctgtcttgtggctacgaggacacctatacctatatccactgaaaggagaaacacttcctg 431

                                                                       
Query: 61  gtttgaactgcacttagtgggaccagcttaggggggcagtgctgctaagatgcatgactt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gtttgaactgcacttagtgggaccagcttaggggggcagtgctgctaagatgcatgactt 371

                                                                       
Query: 121 tcttcttcaaactcctccaggcacacagagctgatctgtacaatcttgcctggacttcat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tcttcttcaaactcctccaggcacacagagctgatctgtacaatcttgcctggacttcat 311

                                                                       
Query: 181 ttcttaaaaagtacgttttagcattgcagggataagaatggtaccctagcctgatttgat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ttcttaaaaagtacgttttagcattgcagggataagaatggtaccctagcctgatttgat 251

                                                                       
Query: 241 ggctgtattttgcaaagaggcttcagatccaagctctcatctgatttctgcatctc-ttt 299
           ||||| |   |||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 250 ggctg-agagtgcaaagaggcttcagatccaagctctcatctgatttctgcatctctttt 192

                                                                       
Query: 300 ttacaggtggagaattaagagttttagagaaatgtgtctgcccaggagtcatctttagtg 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 ttacaggtggagaattaagagttttagagaaatgtgtctgcccaggagtcatctttagtg 132

                                                                       
Query: 360 ctagcgttcagtttgaaactcagatctatggaatgcctaagcccagttctttcccggccc 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 ctagcgttcagtttgaaactcagatctatggaatgcctaagcccagttctttcccggccc 72

                                                                       
Query: 420 caggagttcagaaggttccattgaaattgcccagccccaggagccagcatcataacgcaa 479
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 71  caggagttcagaaggttccattgaaatcgcccagccccaggagccagcatcataacgcaa 12

                      
Query: 480 ggggagggctg 490
           |||||||||||
Sbjct: 11  ggggagggctg 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 903
Length adjustment: 10
Effective length of query: 494
Effective length of database: 893
Effective search space:   441142
Effective search space used:   441142
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)