Query= MSMg01no354_m10.b1 MSMg01no354_m10.b1 CHROMAT_FILE:
MSMg01no354_m10.b1 PHD_FILE: MSMg01no354_m10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:02 2005
(601 letters)
>mm_chr9_79359348_79360345
Length = 998
Score = 1042 bits (539), Expect = 0.0
Identities = 582/601 (96%), Gaps = 11/601 (1%)
Strand = Plus / Minus
Query: 5 gaattccactattg--tcaatgagtaaaataacaaaagaagtgatgacaagttaaatatt 62
||||||||||| || | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 gaattccactaatggat--atgagtaaaataacaaaagaagtgatgacaagttaaatatt 741
Query: 63 aaagacaaatcagacatggtcttctctcatgcctgctctaaattgccatccaatgtattc 122
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 740 aaagacaaatcagacatggtctgctctcatgcctgctctaaattgccatccaatgtattc 681
Query: 123 tattgggtaattgtcttattttgatggttttgcaataatggaaacaaaggaaaaatgggg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tattgggtaattgtcttattttgatggttttgcaataatggaaacaaaggaaaaatgggg 621
Query: 183 aagaaagtctacccacctcatagatgatgaacatatgattctgattacaaattataacat 242
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aagaaaatctacccacctcatagatgatgaacatatgattctgattacaaattataacat 561
Query: 243 gatttctctttatttatagagaaagaatgtgagttattctttgaaaaatatttcatttgt 302
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 560 gatttctctttatttatagagaaagaatgtgagttattctttgaaaaatatttcgtttgt 501
Query: 303 caagtggatgctttccaatggctgtgtatctagacaaaaataatttgtatatagatggat 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 caagtggatgctttccaatggctgtgtatctagacaaaaataatttgtatatagatggat 441
Query: 363 cagatgacttcaactaattttaaaggagcgtgccagatgatagattttcttactgttatt 422
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 440 cagatgacttcaactaattttaaaggagcgtgccagatgatagattttcttactgtgatt 381
Query: 423 gatagagctaattttattgtcttgaataaaggaaatgcacatgacttga--tttttttgt 480
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 380 gatagagctaattttattgtcttgaataaaggaaatgcacatgacttgatttttttttgt 321
Query: 481 tagttttaagacagaagcaagtggtaatctttgagggtccacaggttgccatgtcacagg 540
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 320 tagttttaagacagaagcaagtggtaatctttgaaggtccacaggttgccatgtcacagg 261
Query: 541 tatgcatgctactgttctgaacatcattgctgttgaaaacatgcatgcagttgcttctgc 600
|||||||||||||| |||| |||||||||||||||||||||||| |||||||||||
Sbjct: 260 tatgcatgctactgctctg-----cattgctgttgaaaacatgcatgcggttgcttctgc 206
Query: 601 a 601
|
Sbjct: 205 a 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 601
Length of database: 998
Length adjustment: 10
Effective length of query: 591
Effective length of database: 988
Effective search space: 583908
Effective search space used: 583908
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no354_m10.g1 MSMg01no354_m10.g1 CHROMAT_FILE:
MSMg01no354_m10.g1 PHD_FILE: MSMg01no354_m10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:02 2005
(603 letters)
>mm_chr9_79275466_79276469
Length = 1004
Score = 356 bits (184), Expect = e-102
Identities = 193/196 (98%), Gaps = 1/196 (0%)
Strand = Plus / Plus
Query: 2 ccattgggccaaaggctgtataaaattgcttgttgctgagcaatacagtagatctgcacc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ccattgggccaaaggctgtataaaattgcttgttgctgagcaatacagtagatctgcacc 261
Query: 62 tcaaggctgttctctagagtctgtctcctgggttggtgatttggactccctcacccactc 121
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tcaaggctggtctctagagtctgtctcctgggttggtgatttggactccctcacccactc 321
Query: 122 ctggatcccagttcccacaacatggataagcattgttggtcaagatggcaaaatttcatt 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ctggatcccagttcccacaacatggataagcattgttggtcaagatggcaaaatttcatt 381
Query: 182 a-aaaaatgtgtgtgt 196
||||||||||||||
Sbjct: 382 ttaaaaatgtgtgtgt 397
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1004
Length adjustment: 10
Effective length of query: 593
Effective length of database: 994
Effective search space: 589442
Effective search space used: 589442
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
