Query= MSMg01no355_m22.b1 MSMg01no355_m22.b1 CHROMAT_FILE:
MSMg01no355_m22.b1 PHD_FILE: MSMg01no355_m22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:21 2005
(477 letters)
>mm_chr9_32357928_32358804
Length = 877
Score = 899 bits (465), Expect = 0.0
Identities = 471/473 (99%)
Strand = Plus / Plus
Query: 5 gaattccatatcaggagaaagcatactttatctgcccagatctgcccgcgtggggggctc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccatatcaggagaaagcatactttatctgcccagatctgcccgcgtggggggctc 264
Query: 65 tgctcaagactggagggcgttattcattatttccttctcaacaatatcccgattttctct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgctcaagactggagggcgttattcattatttccttctcaacaatatcccgattttctct 324
Query: 125 cccgtccctcccccaaagcgccacatattgaaacattttgctccttaataagagcagacc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cccgtccctcccccaaagcgccacatattgaaacattttgctccttaataagagcagacc 384
Query: 185 caagagctagaaggtgaaaggccaggctgggactggtgactggagcagcccgggatcctt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 385 caagagctagaaggtgaaaggccaggctgggactggtgactggagcagcccgggatcttt 444
Query: 245 gcccacaaccacgttgcccctccctacacattcctgactgtagcttaggaaaacaagacc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gcccacaaccacgttgcccctccctacacattcctgactgtagcttaggaaaacaagacc 504
Query: 305 tcagaggaagggagggggctaacagtccggagccagggtccctggaattctgctcttagg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tcagaggaagggagggggctaacagtccggagccagggtccctggaattctgctcttagg 564
Query: 365 attcttggggagatgtcttctttcccaaagggacagcatactatttcaaacaatggtcaa 424
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 attcttggggagatgtcgtctttcccaaagggacagcatactatttcaaacaatggtcaa 624
Query: 425 tagaaattactgtctacatgtacatcccgtgttcttaaagataagctttcttt 477
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tagaaattactgtctacatgtacatcccgtgttcttaaagataagctttcttt 677
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 877
Length adjustment: 10
Effective length of query: 467
Effective length of database: 867
Effective search space: 404889
Effective search space used: 404889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no355_m22.g1 MSMg01no355_m22.g1 CHROMAT_FILE:
MSMg01no355_m22.g1 PHD_FILE: MSMg01no355_m22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:21 2005
(451 letters)
>mm_chr9_32531876_32532728
Length = 853
Score = 849 bits (439), Expect = 0.0
Identities = 449/453 (99%), Gaps = 2/453 (0%)
Strand = Plus / Minus
Query: 1 agtatttctccattgaatcaactctgttctctcccatccaatgtaaattcaggaacttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 agtatttctccattgaatcaactctgttctctcccatccaatgtaaattcaggaacttga 594
Query: 61 attgtaggggttttcctttgtgtctttgtt--cccccccttagattaaaaactccatgaa 118
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 593 attgtaggggttttcctttgtgtctttgttcccccccccttagattaaaaactccatgaa 534
Query: 119 aagaactttcctgatagtggaaattggctggagccacgtgtggaaaatgtaggccaagcc 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 aagaactttcctgatagtggaaattggctggagccacgtgtggaaaatgtaggccaagcc 474
Query: 179 taatggagtgtcggtagggctactataaactgagcctgggatggatttggcggggtggcc 238
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 taatggagtgtcggtaggactactataaactgagcctgggatggatttggcggggtggcc 414
Query: 239 ccacatcaccttcctctacgcatgcaagttgggacaatgtgaagccctcttgagatgata 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 ccacatcaccttcctctacgcatgcaagttgggacaatgtgaagccctcttgagatgata 354
Query: 299 gccaagcaaggacagcagcagagagcctgggaaggattccctggggctgattttcaaccc 358
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 tccaagcaaggacagcagcagagagcctgggaaggattccctggggctgattttcaaccc 294
Query: 359 cagctctctggagtcttgtatggtcagcagtgctaagcggatacatttctatgctggttt 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 cagctctctggagtcttgtatggtcagcagtgctaagcggatacatttctatgctggttt 234
Query: 419 ctgcttcctgtcagggcagcaagcatttccata 451
|||||||||||||||||||||||||||||||||
Sbjct: 233 ctgcttcctgtcagggcagcaagcatttccata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 853
Length adjustment: 10
Effective length of query: 441
Effective length of database: 843
Effective search space: 371763
Effective search space used: 371763
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
