Query= MSMg01no356_d02.b1 MSMg01no356_d02.b1 CHROMAT_FILE:
MSMg01no356_d02.b1 PHD_FILE: MSMg01no356_d02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:51 2005
(664 letters)
>mm_chr9_83663052_83664115
Length = 1064
Score = 1201 bits (621), Expect = 0.0
Identities = 651/661 (98%)
Strand = Plus / Plus
Query: 4 ggaattcttaagcaaagtacagctcacaccctaatgtcatagaaaggaaacaagcacaat 63
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttaagcagagcacagctcacaccctaatgtcatagaaaggaaacaagcacaat 263
Query: 64 acgtccacacacgtggcttcagttttcctgtgatgtgcagcttctacaggttttcttcca 123
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 acgtccacacgcgtggcttcagttttcctgtgatgtgcagcttctacaggttttcttcca 323
Query: 124 aaaatcaccgtagacccagtaccaataggtgtcacatgcgtttgttgtgattcaatgggc 183
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
Sbjct: 324 aaaatcaccgtagacccagtatcaataggtgtcacatgcgtttgttgtgattcaatggac 383
Query: 184 aaaacagaccacgagcagagttttaatcaccatttgggatcagtcgggctttaatgaaga 243
|||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 384 aaaacagaccacgagcagtgttttaatcaccatttgggatcagtcggcctttaatgaaga 443
Query: 244 cctttggaaagtgagtattctcacctgcttattaaggggcctttttacatctctgcacac 303
|||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 444 cctttggaaattgagtattctcacctgcttattaagggccctttttacatctctgcacac 503
Query: 304 ttcagttattgcctgtgggttttacaacttacttttggcttcatgctgcaccagaagctg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttcagttattgcctgtgggttttacaacttacttttggcttcatgctgcaccagaagctg 563
Query: 364 gatgcaaaaccaaaccttgctttctaggtaccagtcaattaattttcataatagaaggaa 423
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 564 gatgcaaaaccaaaccttgctttctaggtacctgtcaattaattttcataatagaaggaa 623
Query: 424 aactagccctggggctggagagatggtccagccgagaggagcctcactgctctcacagag 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aactagccctggggctggagagatggtccagccgagaggagcctcactgctctcacagag 683
Query: 484 gatccagcttcagttcctcgcacaggcaactccagcatccaggggacctgacacccactt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gatccagcttcagttcctcgcacaggcaactccagcatccaggggacctgacacccactt 743
Query: 544 ctgcctcggaaggtgctgcccctgtgcgcatgtacccacactcagacacagagctacaaa 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ctgcctcggaaggtgctgcccctgtgcgcatgtacccacactcagacacagagctacaaa 803
Query: 604 tatttttaaacattaaaataatcccttatcaattgctactttcgattgcaatatggcttc 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 tatttttaaacattaaaataatcccttatcaattgctactttcgattgcaatatggcttc 863
Query: 664 t 664
|
Sbjct: 864 t 864
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space: 689316
Effective search space used: 689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no356_d02.g1 MSMg01no356_d02.g1 CHROMAT_FILE:
MSMg01no356_d02.g1 PHD_FILE: MSMg01no356_d02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:51 2005
(498 letters)
>mm_chr9_83726529_83727426
Length = 898
Score = 663 bits (343), Expect = 0.0
Identities = 367/375 (97%), Gaps = 2/375 (0%)
Strand = Plus / Minus
Query: 1 tataaacatgttaaagagaaattcagagtgtgtgagaaaaagc-aaagaggatgtatgga 59
||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||
Sbjct: 374 tataaacatgttaaagagaaattcagagtgtgtgagaaaaagcaaaata-gatgtatgga 316
Query: 60 aatgaaatgtgcaaggtatgcaatagaaagtacattgtgtggggttagaagttaatttgc 119
|||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 315 aatgaaatgtgcaaggtatgcaatagaaagtacattatgtggggttagaagataatttgc 256
Query: 120 tgggaaaagaaaaaaaatcactaggcttgaaagcacaatttaaaaactgtatgaagggct 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 tgggaaaagaaaaaaaatcactaggcttgaaagcacaatttaaaaactgtatgaagggct 196
Query: 180 ggagagatggttcagcagctaagagcacttcttgcttttgcagaagccccacatcaggtg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 ggagagatggttcagcagctaagagcacttcttgcttttgcagaagccccacatcaggtg 136
Query: 240 ctcaccatcactggtgactccagctccaacgggaatctggtgcatctgagatacccacac 299
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 ctcaccatcgctggtgactccagctccaacgggaatctggtgcatctgagatacccacac 76
Query: 300 tcaggtgcatttaccacagatgcgcacgcacaaacacaactacaaataataaaaagaagt 359
||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 75 tcaggtgcatttaccacagatgcacacacacaaacacaactacaaataataaaaagaagt 16
Query: 360 ctttattttagaata 374
|||||||||||||||
Sbjct: 15 ctttattttagaata 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 898
Length adjustment: 10
Effective length of query: 488
Effective length of database: 888
Effective search space: 433344
Effective search space used: 433344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
