Query= MSMg01no358_c09.b1 MSMg01no358_c09.b1 CHROMAT_FILE:
MSMg01no358_c09.b1 PHD_FILE: MSMg01no358_c09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:20 2005
(511 letters)
>mm_chr9_70611275_70612185
Length = 911
Score = 975 bits (504), Expect = 0.0
Identities = 507/508 (99%)
Strand = Plus / Minus
Query: 4 ggaattctctttgtaagatctcaaaatcacctcaatacactatcatttaccgtgaattac 63
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 711 ggaattctctttgtaagatctcaaaatcacctcaatacacaatcatttaccgtgaattac 652
Query: 64 aagaaacaaatgccttcatttctagtaagcaaaactaagttataaggagcctatgacttg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 aagaaacaaatgccttcatttctagtaagcaaaactaagttataaggagcctatgacttg 592
Query: 124 cttgtaccccatgtgtatataccccgatatgatcaaacagatgaaatgcaggggttcttg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 cttgtaccccatgtgtatataccccgatatgatcaaacagatgaaatgcaggggttcttg 532
Query: 184 ggtcttaaattttaggcttttgtttctaatgcaccaatcaggatttagaatgtgaactga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 ggtcttaaattttaggcttttgtttctaatgcaccaatcaggatttagaatgtgaactga 472
Query: 244 ataaactactgaatgaagggaacacacacctagcacaaaaacctcactgtggcacaggtg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 ataaactactgaatgaagggaacacacacctagcacaaaaacctcactgtggcacaggtg 412
Query: 304 attgaaaatcactccaggaaggtaggctttacacttatcaagttcattcttaattcatta 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 attgaaaatcactccaggaaggtaggctttacacttatcaagttcattcttaattcatta 352
Query: 364 aagaaaatcttaacagtcactgaaattgtagcccactaactgaccttatatgatgtcttt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 aagaaaatcttaacagtcactgaaattgtagcccactaactgaccttatatgatgtcttt 292
Query: 424 ggactgttctagtagaacaaccatcataagtaaaacaatgactttaaatggctagtaact 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 ggactgttctagtagaacaaccatcataagtaaaacaatgactttaaatggctagtaact 232
Query: 484 ttataattcatgtgacatataattctag 511
||||||||||||||||||||||||||||
Sbjct: 231 ttataattcatgtgacatataattctag 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 911
Length adjustment: 10
Effective length of query: 501
Effective length of database: 901
Effective search space: 451401
Effective search space used: 451401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no358_c09.g1 MSMg01no358_c09.g1 CHROMAT_FILE:
MSMg01no358_c09.g1 PHD_FILE: MSMg01no358_c09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:20 2005
(475 letters)
>mm_chr9_70432455_70433325
Length = 871
Score = 899 bits (465), Expect = 0.0
Identities = 471/475 (99%), Gaps = 4/475 (0%)
Strand = Plus / Plus
Query: 1 tttgaaacgcccacgtgacgtagaccataggtagctgcttcctttcttctttctcggtct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgaaacgcccacgtgacgtagaccataggtagctgcttcctttcttctttctcggtct 260
Query: 61 ggcgtgcgctagcagacaggagcggtctgctttctctagcttgcctcttctcacaccaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggcgtgcgctagcagacaggagcggtctgctttctctagcttgcctcttctcacaccaga 320
Query: 121 tgacttcttattaaaactggagcgacacagacataatcagggttgatagttctcaaagtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgacttcttattaaaactggagcgacacagacataatcagggttgatagttctcaaagtc 380
Query: 181 aggcctttaaaatacttaccaaggcagagaataaacaaatggaagtcatgaattggtgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggcctttaaaatacttaccaaggcagagaataaacaaatggaagtcatgaattggtgtg 440
Query: 241 tttatattcatgcttccttggtagagtttaaaatataattttttaatatagttttcttag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttatattcatgcttccttggtagagtttaaaatataattttttaatatagttttcttag 500
Query: 301 tacaagttctgagcactttagatttttgtttgttttttgttttagtggagaaatgggtgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tacaagttctgagcactttagatttttgtttgttttttgttttagtggagaaatgggtgc 560
Query: 361 tctggtcttctctcttcagcgtctgtgagggtcacagttgctgaggctaaggatgcagct 420
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tctggtcttctc----cagcgtctgtgagggtcacagttgctgaggctaaggatgcagct 616
Query: 421 cggtcttggggtacttccctttcatgagacaggtccggggtcatcccctgcactt 475
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 cggtcttggggtacttccctttcatgagacaggtccggggtcatcccctgcactt 671
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 871
Length adjustment: 10
Effective length of query: 465
Effective length of database: 861
Effective search space: 400365
Effective search space used: 400365
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
