Query= MSMg01no358_e10.b1 MSMg01no358_e10.b1 CHROMAT_FILE:
MSMg01no358_e10.b1 PHD_FILE: MSMg01no358_e10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:30 2005
(501 letters)
>mm_chr9_60831262_60832165
Length = 904
Score = 911 bits (471), Expect = 0.0
Identities = 491/499 (98%), Gaps = 3/499 (0%)
Strand = Plus / Plus
Query: 6 ggaattcagcatcttatggcgtgctggtcactctgggcagtcagtgacctgggaagtctt 65
|||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ggaattcagcatctcatggtgtgctggtcactctgggcagtcagtgacctgggaagtctt 265
Query: 66 ggcacatccacaggaaggtatgagtttaaatcccagctctgcttttagtgttcaatccct 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ggcacatccacaggaaggtatgagtttaaatcccagctctgcttttagtgttcaatccct 325
Query: 126 tgctagtcattcaagcttgagagtcccagcttcctcatctgtctccccctgggcttgctc 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tgctagtcattcaagcttgagagtcccagcttcctcatctgtctccccctgggcttgctc 385
Query: 186 ttccggagtgtctggtcactctccctcctcactggtgttggggaaggccaggttctgctg 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ttccggagtgtctggtcactctccctcctcactggtgttggggaaggccaggttctgctg 445
Query: 246 gaagcctcaagcttcacactccgaagtcagaacgccaacctaagggaagcttttgttaag 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gaagcctcaagcttcacactccgaagtcagaacgccaacctaagggaagcttttgttaag 505
Query: 306 cttaggtgtgtaccttcccagggagtcaggaaagcagcccttctgcattagggggtg--- 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 506 cttaggtgtgtaccttcccagggagtcaggaaagcagcccttctgcattagggggggggg 565
Query: 363 tgtgttccctgcctgtgagtttgttcgtatttctcccaggaaagtgttcggggtaccttt 422
||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 566 tgtgttccctgcctgtgagtttgtttgtatttctcccaggaaagtgttcagggtaccttt 625
Query: 423 gtttgaatttctcaagggacaggaggagaaggccatcctcaaggaggaggggtgtgtagg 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 gtttgaatttctcaagggacaggaggagaaggccatcctcaaggaggaggggtgtgtagg 685
Query: 483 tcttgctttagcttttcag 501
|||||||||||||||||||
Sbjct: 686 tcttgctttagcttttcag 704
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 501
Length of database: 904
Length adjustment: 10
Effective length of query: 491
Effective length of database: 894
Effective search space: 438954
Effective search space used: 438954
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no358_e10.g1 MSMg01no358_e10.g1 CHROMAT_FILE:
MSMg01no358_e10.g1 PHD_FILE: MSMg01no358_e10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:30 2005
(451 letters)
>mm_chr9_61027894_61028745
Length = 852
Score = 690 bits (357), Expect = 0.0
Identities = 366/369 (99%), Gaps = 1/369 (0%)
Strand = Plus / Minus
Query: 84 agcaagatagctcagtggataaaggtgcctgccaccaagtctgatgatctgagttcaatt 143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852 agcaagatagctcagtggataaaggtgcctgccaccaagtctgatgatctgagttcaatt 793
Query: 144 cccaggacacacatagtggaaggagagaactaacttccacaaattgtcctctgatccttg 203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 cccaggacacacatagtggaaggagagaactaacttccacaaattgtcctctgatccttg 733
Query: 204 tctgtgtgctgtggcacatgtgtccactcacatgtacatacatgcacataaaataaaatt 263
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 732 tctgtgtgctgtggcacatgtgtccactcacatgcacatacatgcacataaaataaaatt 673
Query: 264 aaaattaattacaatttaatgtaggtgttctagatataagtccttatttggaaacatggt 323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 aaaattaattacaatttaatgtaggtgttctagatataagtccttatttggaaacatggt 613
Query: 324 tagcaaatatttcttactc-ttttttttctgctcaaatagttctcatttacctttaagat 382
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 tagcaaatatttcttactctttttttttctgctcaaatagttctcatttacctttaagat 553
Query: 383 aaaactggcatctattcacctggtgaagaattttctagaattcaagctatgaggatccct 442
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 552 aaaactggcatctattcacctggtgaagaattttctagaattcgagctatgaggatccct 493
Query: 443 tgtctagtt 451
|||||||||
Sbjct: 492 tgtctagtt 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 852
Length adjustment: 10
Effective length of query: 441
Effective length of database: 842
Effective search space: 371322
Effective search space used: 371322
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
