Query= MSMg01no359_m20.b1 MSMg01no359_m20.b1 CHROMAT_FILE:
MSMg01no359_m20.b1 PHD_FILE: MSMg01no359_m20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:22 2005
(371 letters)
>mm_chr9_107945191_107945959
Length = 769
Score = 623 bits (322), Expect = 0.0
Identities = 335/342 (97%), Gaps = 6/342 (1%)
Strand = Plus / Minus
Query: 7 gaattccttgtatagccgctgatggtctatataattttccataatatgtatacaagatac 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gaattccttgtatagccgctgatggtctatataattttccataatatgtatacaagatac 281
Query: 67 ccactgatctctatttttttaattttggagtaggcatgttatggtgtatgtgtggcgtat 126
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 280 ccactgatctctatttttttaattttggagtaggcatgttatggtgtatgtgtg--gtgt 223
Query: 127 atacttgttgtagtgggtgtgtggatacacatatgtgaagggcagaggacatcatcaggt 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 atacttgttgtagtgggtgtgtggatacacatatgtgaagggcagaggacatcatcaggt 163
Query: 187 gactcttctccattggactcta----tattttttgagacagtgagcttcaggaacctgtc 242
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 162 gactcttctccattggactctatctttattttttgagacagtgagcttcaggaacctgtc 103
Query: 243 tctttgtctctacactctcagtgctgtagttacaggcatagcctggctttttttgagctc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 tctttgtctctacactctcagtgctgtagttacaggcatagcctggctttttttgagctc 43
Query: 303 tgcagatcttcaggctcacagagcaggcacattactggctca 344
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42 tgcagatcttcaggctcacagagcaggcacattactggctca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 769
Length adjustment: 9
Effective length of query: 362
Effective length of database: 760
Effective search space: 275120
Effective search space used: 275120
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no359_m20.g1 MSMg01no359_m20.g1 CHROMAT_FILE:
MSMg01no359_m20.g1 PHD_FILE: MSMg01no359_m20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:22 2005
(340 letters)
>mm_chr9_107749611_107750350
Length = 740
Score = 601 bits (311), Expect = e-176
Identities = 320/325 (98%), Gaps = 4/325 (1%)
Strand = Plus / Plus
Query: 1 aaaatgtgctaaatgaaattaggcataatgacaaacctataatcccagctggccaagaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaatgtgctaaatgaaattaggcataatgacaaacctataatcccagctggccaagaat 260
Query: 61 cacacgggctttatgtcaccatgaacagagggaagcacaccacagagagaaaggaacaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacacgggctttatgtcaccatgaacagagggaagcacaccacagagagaaaggaacaga 320
Query: 121 aactgaatacaatatacataggaataagagctgggttaagaatgaggttcaaactgggcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aactgaatacaatatacataggaataagagctgggttaagaatgaggttcaaactgggcg 380
Query: 181 tggtggcacacacctttaatcccagcacttgggaggcagaggcaggcggatttctgagtt 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgatggcacacacctttaatcccagcacttgggaggcagaggcaggcggatttctgagtt 440
Query: 241 cgaggccagcctggtctacaaagtgagttccaggacagccagggctacacagagaaaccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cgaggccagcctggtctacaaagtgagttccaggacagccagggctacacagagaaaccc 500
Query: 301 tgtctcggg----aaaaaaaaaaaa 321
||||||||| ||||||||||||
Sbjct: 501 tgtctcgggggggaaaaaaaaaaaa 525
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 740
Length adjustment: 9
Effective length of query: 331
Effective length of database: 731
Effective search space: 241961
Effective search space used: 241961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
