Query= MSMg01no360_g07.b1 MSMg01no360_g07.b1 CHROMAT_FILE:
MSMg01no360_g07.b1 PHD_FILE: MSMg01no360_g07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:55:07 2005
(244 letters)
>mm_chr9_13531644_13532287
Length = 644
Score = 464 bits (240), Expect = e-135
Identities = 243/244 (99%)
Strand = Plus / Plus
Query: 1 gcagtgcctctgaggtagtctccctcttaggtttcttaaggagaatcacagtggaggttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcagtgcctctgaggtagtctccctcttaggtttcttaaggagaatcacagtggaggttt 260
Query: 61 tgctcacagaccattccatttcttaacctggttgtaaatgtaatggcctgtttcaattga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgctcacagaccattccatttcttaacctggttgtaaatgtaatggcctgtttcaattga 320
Query: 121 ccacttggttacactaagaaatgcctagagcataagtgaaggacacctctggacatggtc 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 ccacttggttacactaagaaatgcctagggcataagtgaaggacacctctggacatggtc 380
Query: 181 tgtgaaggaggagaaaagacttgcatggaactcagactggatagaagaggagaacagaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtgaaggaggagaaaagacttgcatggaactcagactggatagaagaggagaacagaga 440
Query: 241 gaga 244
||||
Sbjct: 441 gaga 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no360_g07.g1 MSMg01no360_g07.g1 CHROMAT_FILE:
MSMg01no360_g07.g1 PHD_FILE: MSMg01no360_g07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:55:08 2005
(368 letters)
>mm_chr9_13702610_13703376
Length = 767
Score = 617 bits (319), Expect = 0.0
Identities = 335/341 (98%), Gaps = 3/341 (0%)
Strand = Plus / Minus
Query: 30 gcacacacacacacacacacacacacacacacacacacacac--acacacacaccgctta 87
|||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 622 gcacacacacacacacacacacacacacacacacacacacacatacacacacactgctta 563
Query: 88 gcagctgaatacaacacagaacgtgtctatttttgaccgctataaagactaaccagcagg 147
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 562 gcagctgaatacaacacagaacgtgtctatttttgaccgctataaagactagccagcagg 503
Query: 148 cctgcaaattcatgcctcagcaatcactgtcaagcccgttgcttaggaacacagaggttt 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 cctgcaaattcatgcctcagcaatcactgtcaagcccgttgcttaggaacacagaggttt 443
Query: 208 ccaaaatggtcttgtccatctctcctctgcgcatgcaccgtctccctaccaggaagtgtc 267
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 442 ccaaaatggtcttgtccatctctcctctgcgcatgcaccg-atccctaccaggaagtgtc 384
Query: 268 tgtcgtgttatatcaggagcccacaatgagcaggacatacccccataggtgatccagtct 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tgtcgtgttatatcaggagcccacaatgagcaggacatacccccataggtgatccagtct 324
Query: 328 agaagggacaacagcaggggagatggtgattatgatgcagc 368
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 agaagggacaacagcaggggagatggtgattatgatgcagc 283
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 55
Number of extensions: 21
Number of successful extensions: 20
Number of sequences better than 10.0: 1
Number of HSP's gapped: 15
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 767
Length adjustment: 9
Effective length of query: 359
Effective length of database: 758
Effective search space: 272122
Effective search space used: 272122
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|