Query= MSMg01no361_h10.b1 MSMg01no361_h10.b1 CHROMAT_FILE:
MSMg01no361_h10.b1 PHD_FILE: MSMg01no361_h10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:31 2005
(620 letters)
>mm_chr9_59466472_59467491
Length = 1020
Score = 1168 bits (604), Expect = 0.0
Identities = 615/622 (98%), Gaps = 6/622 (0%)
Strand = Plus / Minus
Query: 5 gaattcaaggcatgtttgggccacagaatgagctccaggacagccaggactagaaagaga 64
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 955 gaattcaaggcaagtttgggccacagaatgagctccaggacagccaggactagaaagaga 896
Query: 65 aatcttgtctca------aaaaacaaaaacaaaaacaaaacccagaatttttaaaggcag 118
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 aatcttgtctcaaaaaacaaaaacaaaaacaaaaacaaaacccagaatttttaaaggcag 836
Query: 119 aggcaaaaggttctctctgtgttctccaccagtgcagactacatactgagtctcaggaga 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 aggcaaaaggttctctctgtgttctccaccagtgcagactacatactgagtctcaggaga 776
Query: 179 gccaagagctacatttcacaaaacaaacaacagcaacaaaaaatggaaactgatgaagct 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 gccaagagctacatttcacaaaacaaacaacagcaacaaaaaatggaaactgatgaagct 716
Query: 239 aatgtacacaagggtttcctatatgccctacttttgggtacatagttgaaattttctaca 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 aatgtacacaagggtttcctatatgccctacttttgggtacatagttgaaattttctaca 656
Query: 299 tttataaaatcaaatgctttccctttgtctctgtgctctctgctgttcttcaaacacagt 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 tttataaaatcaaatgctttccctttgtctctgtgctctctgctgttcttcaaacacagt 596
Query: 359 aagaatagtcccactacacatcttgtctctactgttctcccctttaggattcctttttag 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 aagaatagtcccactacacatcttgtctctactgttctcccctttaggattcctttttag 536
Query: 419 atatccacactctggccaaaggtcaccttgactgcccatataaaatacccacactagcat 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 atatccacactctggccaaaggtcaccttgactgcccatataaaatacccacactagcat 476
Query: 479 tctcgatccccctccacattgttttcttcaccacagctctgaccactcttacatttatct 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 tctcgatccccctccacattgttttcttcaccacagctctgaccactcttacatttatct 416
Query: 539 ctcaccagactgtaagctctctctgtatatgagtactttgtcttcaggcacaccagaagt 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 ctcaccagactgtaagctctctctgtatatgagtactttgtcttcaggcacaccagaagt 356
Query: 599 gggcatcagatcccattacagg 620
||||||||||||||||||||||
Sbjct: 355 gggcatcagatcccattacagg 334
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1020
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1010
Effective search space: 616100
Effective search space used: 616100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no361_h10.g1 MSMg01no361_h10.g1 CHROMAT_FILE:
MSMg01no361_h10.g1 PHD_FILE: MSMg01no361_h10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:31 2005
(503 letters)
>mm_chr9_59340286_59341188
Length = 903
Score = 965 bits (499), Expect = 0.0
Identities = 502/503 (99%)
Strand = Plus / Plus
Query: 1 catgtactaatattcaaaacagaaaatcagaaagagctagacatggagatgtggttttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catgtactaatattcaaaacagaaaatcagaaagagctagacatggagatgtggttttta 260
Query: 61 taagggttgacgtttactggattgagaagcagaataggataatggtgaggcacttaagcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taagggttgacgtttactggattgagaagcagaataggataatggtgaggcacttaagcc 320
Query: 121 atgaaggagatcagaatgtacctctgtacttctagttgttgtctgtaactcaagaaaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgaaggagatcagaatgtacctctgtacttctagttgttgtctgtaactcaagaaaatt 380
Query: 181 cttgactctcgatgagctttactataaaggatcgtaattcctactctcatagcattactc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttgactctcgatgagctttactataaaggatcgtaattcctactctcatagcattactc 440
Query: 241 acagcagtggaagtgtagctctttaatagagcatttgcctagcatgagcgaagctctagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acagcagtggaagtgtagctctttaatagagcatttgcctagcatgagcgaagctctagg 500
Query: 301 tccaattcccaacaacacaaacacacacatatacacactaattgtatcaaatgaaaactg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tccaattcccaacaacacaaacacacacatatacacactaattgtatcaaatgaaaactg 560
Query: 361 tatttaaagtatctgaggccagatgcacacttttaatcccaatatttaagaggtggagac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatttaaagtatctgaggccagatgcacacttttaatcccaatatttaagaggtggagac 620
Query: 421 aactggatctctgtaaatttgaaactagtataagctaaactgagttgccagaatagcaaa 480
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aattggatctctgtaaatttgaaactagtataagctaaactgagttgccagaatagcaaa 680
Query: 481 ggttacccagtgagaccctgtct 503
|||||||||||||||||||||||
Sbjct: 681 ggttacccagtgagaccctgtct 703
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 903
Length adjustment: 10
Effective length of query: 493
Effective length of database: 893
Effective search space: 440249
Effective search space used: 440249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
