Query= MSMg01no361_n18.b1 MSMg01no361_n18.b1 CHROMAT_FILE:
MSMg01no361_n18.b1 PHD_FILE: MSMg01no361_n18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:01 2005
(551 letters)
>mm_chr9_94356470_94357420
Length = 951
Score = 1050 bits (543), Expect = 0.0
Identities = 546/547 (99%)
Strand = Plus / Plus
Query: 5 gaattcccctctttgcaccagcacgggtctgattatagctcctgcatttgcctctttaaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcccctctttgcaccagcacgggtctgattatagctcctgcatttgcctctttaaa 264
Query: 65 caaagactatcttaattacccaaatgagttttgtaactattacttagcaaggcattacct 124
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 265 caaagactatcttaattacccagatgagttttgtaactattacttagcaaggcattacct 324
Query: 125 cactctcccaattaagcaaataaatagtctgattttgcaagactgacagggtgaactcag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cactctcccaattaagcaaataaatagtctgattttgcaagactgacagggtgaactcag 384
Query: 185 ccccgccactggattggcatcggagcctgttggcaagcacaggccacatgcttctctctt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ccccgccactggattggcatcggagcctgttggcaagcacaggccacatgcttctctctt 444
Query: 245 caaggctcaaagtccatggattgttgcctagcttcaccatgtcctctctgagtggaaaaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 caaggctcaaagtccatggattgttgcctagcttcaccatgtcctctctgagtggaaaaa 504
Query: 305 aaaagacttacggactaaaatccttcagcctgacttgaagccttagtctcaattggcaga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aaaagacttacggactaaaatccttcagcctgacttgaagccttagtctcaattggcaga 564
Query: 365 cagtgggcaaggcaaactactgtaaggtccctggtttccagtgtgagcctgaaattgaca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cagtgggcaaggcaaactactgtaaggtccctggtttccagtgtgagcctgaaattgaca 624
Query: 425 aatcttaaaagatagcataccagttctcacaaaaagccagtcactttggtgactttgaac 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aatcttaaaagatagcataccagttctcacaaaaagccagtcactttggtgactttgaac 684
Query: 485 tattaaggtatttcccagcagatgccaaagctcttacatggaaggaacaaactatgaata 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tattaaggtatttcccagcagatgccaaagctcttacatggaaggaacaaactatgaata 744
Query: 545 tagacct 551
|||||||
Sbjct: 745 tagacct 751
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 951
Length adjustment: 10
Effective length of query: 541
Effective length of database: 941
Effective search space: 509081
Effective search space used: 509081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no361_n18.g1 MSMg01no361_n18.g1 CHROMAT_FILE:
MSMg01no361_n18.g1 PHD_FILE: MSMg01no361_n18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:01 2005
(516 letters)
>mm_chr9_94556835_94557752
Length = 918
Score = 822 bits (425), Expect = 0.0
Identities = 496/521 (95%), Gaps = 8/521 (1%)
Strand = Plus / Minus
Query: 1 atcttgccagtccagggcaaggttctttacactacagggctgtgaagtccatgcttatac 60
|||| |||| ||||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct: 614 atctcgccaatccagggcaaggttctttacactacagagctgtgcagtccatgcttatac 555
Query: 61 cctgagctgtgtcaacttaagaactcagagtgactgtggcagctccagccatcacattaa 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 554 cctgagctgtgtcaacttaagaactcagagtgactgtggcagctccagctatcacattaa 495
Query: 121 gagagaaaatgacacaaagatgttgtgtcttccctttgccacagt-gaaaactccatg-- 177
||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||
Sbjct: 494 gagagaaaatgacacaaagatgtcgtgtcttccctttgccacagtag-aaactccatgag 436
Query: 178 -tgaactccagctgcctgtgtattctattctacaggcctgactgactgcctgcagacatg 236
|||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 435 aagaactccagctgactgtgtattctattctacaggcctggctgactgcctgcagatatg 376
Query: 237 tctcctggagacatgtctggagtgccacagagaggtcaatgtacaagggccaccatgata 296
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 375 tctcctggagacatgtctggagtgtcacagagaggtcaatgtacaagggccaccatgata 316
Query: 297 tcctttgctga-atctcaaaacctgtgtggaatgcctctgcctcacgcacataaaggttc 355
|||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ccctttgctgaga-ctcaaaacctgtgtggaatgcctctgcctcacgcacataaaggttc 257
Query: 356 actcctggggagagactgcaacttggagtccctgagtggtgcactacaaaaggcattgcg 415
||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||
Sbjct: 256 actcctggggagagactgcaacttggagt-cctgaatggtgcaccacaaaaggcattgca 198
Query: 416 ctacaaaagcctgcagaacagtggcaggcccctccttcccgatccagcctacagcctgtg 475
||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 197 ctacaaaagcccgcagaacagtggcaggccccttcttcccgatccagcctacagcctgtg 138
Query: 476 agatgtcccttcaggacctgtcaaaaatggtgatttctgtc 516
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 agatgtcccttcaggacctgtcaaaaatggtgatttctgtc 97
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 918
Length adjustment: 10
Effective length of query: 506
Effective length of database: 908
Effective search space: 459448
Effective search space used: 459448
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
