Query= MSMg01no362_g15.b1 MSMg01no362_g15.b1 CHROMAT_FILE:
MSMg01no362_g15.b1 PHD_FILE: MSMg01no362_g15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:46 2005
(632 letters)
>mm_chr9_90496539_90497569
Length = 1031
Score = 1160 bits (600), Expect = 0.0
Identities = 621/628 (98%), Gaps = 1/628 (0%)
Strand = Plus / Plus
Query: 5 gaattcaaaaggatcatatcctgggtgtgtcctttgttaatggccataggaagctattgc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaaaggatcatatcctgggtgtgtcctttgttaatggccataggaagctattgc 264
Query: 65 acagagtcctaacgaaacctactcctatatttcaatatctgcatttaaacaaggactacc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 acagagtcctaacgaaacctactcctatatttcaatatctgcatttaaacaaggactacc 324
Query: 125 attcacttttctatgaattcattgaacccattaagaattttatcagtaacacatgaggct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 attcacttttctatgaattcattgaacccattaagaattttatcagtaacacatgaggct 384
Query: 185 gtcaagttgcccttctcataaaatatagataaatactaacatgtacactactttattaat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtcaagttgcccttctcataaaatatagataaatactaacatgtacactactttattaat 444
Query: 245 actgttcaagttccgtctatggtcctaatataggttctaattttctttattatttgtaga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 actgttcaagttccgtctatggtcctaatataggttctaattttctttattatttgtaga 504
Query: 305 actatttaaccttatgtgttattgaacacaaagattaaatgaagaatcttataaatcaaa 364
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 505 actatttaaccttatgtgttattgaacacaaagattaaatgaagaatcttataaatcaga 564
Query: 365 acccatgactgttagaattctcactatctcaacttggaatgttactgtttttcctccctg 424
||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 565 acccatgactgttggaattctcactgtctgaacttggaatgttactgtttttcctccctg 624
Query: 425 taagtctgttataggcttttagggggagcagagataagatatatagaatacatgtcactg 484
|||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||
Sbjct: 625 taagtctgttataggctttt-gggggagcagagataggatatatagaatacacgtcactg 683
Query: 485 ccagacatgtagcctttactattcatttagaatgcaagtttcaaaggagtagggatttat 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ccagacatgtagcctttactattcatttagaatgcaagtttcaaaggagtagggatttat 743
Query: 545 tgttttatttatgcaataatttattcctcatacctagaagaatgactacatataatagca 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tgttttatttatgcaataatttattcctcatacctagaagaatgactacatataatagca 803
Query: 605 actcaaaaatattttcaaataaatgaat 632
||||||||||||||||||||||||||||
Sbjct: 804 actcaaaaatattttcaaataaatgaat 831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1031
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1021
Effective search space: 635062
Effective search space used: 635062
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no362_g15.g1 MSMg01no362_g15.g1 CHROMAT_FILE:
MSMg01no362_g15.g1 PHD_FILE: MSMg01no362_g15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:46 2005
(388 letters)
>mm_chr9_90628430_90629217
Length = 788
Score = 704 bits (364), Expect = 0.0
Identities = 381/394 (96%), Gaps = 13/394 (3%)
Strand = Plus / Minus
Query: 1 tgtgaaggaacaacacctaaacccaagagggcagctgttgcagcacctagttcatcatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 tgtgaaggaacaacacctaaacccaagagggcagctgttgcagcacctagttcatcatga 548
Query: 61 ggatttcaatcagtc------aaaaaaaaaaaaaaagttctcacttcataaaaaccaaaa 114
||||||||||||||| |||||||||||||||||||||||||||| ||||
Sbjct: 547 ggatttcaatcagtcaaaaaaaaaaaaaaaaaaaaagttctcacttcat-------aaaa 495
Query: 115 accaaaaaccaaagcaggaaaaattgtaaggagtattaattcatttgaatcataatgccc 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 accaaaaaccaaagcaggaaaaattgtaaggagtattaattcatttgaatcataatgccc 435
Query: 175 aaacattatttttatggataaggatcatttaacatagcaaccatttaaaagttttgatat 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 aaacattatttttatggataaggatcatttaacatagcaaccatttaaaagttttgatat 375
Query: 235 tacaatttttataagtttattttttgtcttgaataatcaataggttcactaaatttttgc 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tacaatttttataagtttattttttgtcttgaataatcaataggttcactaaatttttgc 315
Query: 295 tttcaatatttaatataaattatttttagcattggaaaatatactgcttttagattacta 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 tttcaatatttaatataaattatttttagcattggaaaatatactgcttttagattacta 255
Query: 355 aaaacatgacttttatattttaaaaaagtcagta 388
||||||||||||||||||||||||||||||||||
Sbjct: 254 aaaacatgacttttatattttaaaaaagtcagta 221
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 388
Length of database: 788
Length adjustment: 9
Effective length of query: 379
Effective length of database: 779
Effective search space: 295241
Effective search space used: 295241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
