Query= MSMg01no362_h21.b1 MSMg01no362_h21.b1 CHROMAT_FILE:
MSMg01no362_h21.b1 PHD_FILE: MSMg01no362_h21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:53 2005
(549 letters)
>mm_chr9_78324912_78325860
Length = 949
Score = 1002 bits (518), Expect = 0.0
Identities = 539/546 (98%), Gaps = 2/546 (0%)
Strand = Plus / Plus
Query: 5 gaattccatccctagaaacatgcttttattctgaatgttttgtcttcaaagcaccagtag 64
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccatccccagaaacatgcttttattctgaatgttttgtcttcaaagcaccagtag 264
Query: 65 atggtgctattccacttatacacgtaagtgtgcaggtttgaaaaacgggtgtttgtatcc 124
||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 265 atggtgctactccacttatacacgtaagtgtgcaggtttgaaaaac-ggtgtttgtatcc 323
Query: 125 agcagacacttgatatcaatttcccaggtaggtcttgattcttatttagggtctaacagc 184
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agcagacacttgctatcaatttcccaggtaggtcttgattcttatttagggtctaacagc 383
Query: 185 ttacttaagctatttcactattagcaatccattttaaccagtcctacttgaaataacctc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttacttaagctatttcactattagcaatccattttaaccagtcctacttgaaataacctc 443
Query: 245 aactaaggaactgacaagcctttagtaaagagtttgcagcaacagcaacccttaatccca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aactaaggaactgacaagcctttagtaaagagtttgcagcaacagcaacccttaatccca 503
Query: 305 caagcactagaactttatccagtctctaagg-taaagatgacacattggatgtttttgcc 363
|||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 504 caagcactagaattttatccagtctctaagggtaaagatgacacattggatgtttttgcc 563
Query: 364 atatcaatggggttattacacatcacttttctgagtctagattatctaaacttaggccac 423
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 atatcaaaggggttattacacatcacttttctgagtctagattatctaaacttaggccac 623
Query: 424 ctgttttcatctcatggacttcatgacatatcctatgcagtcttgccaatccacttccag 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ctgttttcatctcatggacttcatgacatatcctatgcagtcttgccaatccacttccag 683
Query: 484 ggactagcccatgtttgttctgccaaagtcaggctaacatgcctcagttttgaaacttat 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ggactagcccatgtttgttctgccaaagtcaggctaacatgcctcagttttgaaacttat 743
Query: 544 ttcaaa 549
||||||
Sbjct: 744 ttcaaa 749
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 949
Length adjustment: 10
Effective length of query: 539
Effective length of database: 939
Effective search space: 506121
Effective search space used: 506121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no362_h21.g1 MSMg01no362_h21.g1 CHROMAT_FILE:
MSMg01no362_h21.g1 PHD_FILE: MSMg01no362_h21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:53 2005
(443 letters)
>mm_chr9_78501504_78502346
Length = 843
Score = 634 bits (328), Expect = 0.0
Identities = 328/328 (100%)
Strand = Plus / Minus
Query: 1 ttttctactgtaatatttaaaccaatacatcctatcctgatttaacagatattaattaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ttttctactgtaatatttaaaccaatacatcctatcctgatttaacagatattaattaat 269
Query: 61 cccttttccaagactcacaagaaaataggttttctcatttgtcattttctaacttacaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 cccttttccaagactcacaagaaaataggttttctcatttgtcattttctaacttacaat 209
Query: 121 tctaactatgtggatagccttttggggtgccaccaggcaggaatctgaccttaggccaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 tctaactatgtggatagccttttggggtgccaccaggcaggaatctgaccttaggccaca 149
Query: 181 acaaagaagtaagccaaggcaggaatgtgacattagggcatgacgaagaagtaagttcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 acaaagaagtaagccaaggcaggaatgtgacattagggcatgacgaagaagtaagttcag 89
Query: 241 gcagggacctgacattggccaaggacaaggaagtaagaatctaattttaaggtagaacaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 gcagggacctgacattggccaaggacaaggaagtaagaatctaattttaaggtagaacaa 29
Query: 301 agaagtaggctcagatatcttttttttt 328
||||||||||||||||||||||||||||
Sbjct: 28 agaagtaggctcagatatcttttttttt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 843
Length adjustment: 10
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
