Query= MSMg01no362_k19.b1 MSMg01no362_k19.b1 CHROMAT_FILE:
MSMg01no362_k19.b1 PHD_FILE: MSMg01no362_k19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:08 2005
(509 letters)
>mm_chr9_107582171_107583080
Length = 910
Score = 963 bits (498), Expect = 0.0
Identities = 504/506 (99%), Gaps = 1/506 (0%)
Strand = Plus / Minus
Query: 5 gaattc-cacaatgccctgcaaaatgagcacacacacacacccgtgcctagacggagaac 63
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 gaattcacacaaagccctgcaaaatgagcacacacacacacccgtgcctagacggagaac 651
Query: 64 aggtagagcatgctggactgaagtacatgcccagcatgcgggcatcctagacttgatccc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 aggtagagcatgctggactgaagtacatgcccagcatgcgggcatcctagacttgatccc 591
Query: 124 cagtatacacacacagagcaccactgcacatccacaggctgcactcatcatcatttaaac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 cagtatacacacacagagcaccactgcacatccacaggctgcactcatcatcatttaaac 531
Query: 184 aggtatgtaagagcacatgtacttaactactagcaggtacacatacatgcaggtatacag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 aggtatgtaagagcacatgtacttaactactagcaggtacacatacatgcaggtatacag 471
Query: 244 gactgggtgtgtgcacttaacttcgctcgattctagtaaggaacagaaagacacacatgg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 gactgggtgtgtgcacttaacttcgctcgattctagtaaggaacagaaagacacacatgg 411
Query: 304 gctgtgtatagcagactcacccatctaccagcagaggacatgtagacaccatgtacaggg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 gctgtgtatagcagactcacccatctaccagcagaggacatgtagacaccatgtacaggg 351
Query: 364 tcacatttaaccctgagtggtaggcaaatagtcacctattccctcagggctcccaggagg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 tcacatttaaccctgagtggtaggcaaatagtcacctattccctcagggctcccaggagg 291
Query: 424 cacagtaccctctggtccagagacaccccactcttctaagccactgctaattatgtgagc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 cacagtaccctctggtccagagacaccccactcttctaagccactgctaattatgtgagc 231
Query: 484 ctcttctaatcggtaaaatggggctg 509
||||||||||||||||||||||||||
Sbjct: 230 ctcttctaatcggtaaaatggggctg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 509
Length of database: 910
Length adjustment: 10
Effective length of query: 499
Effective length of database: 900
Effective search space: 449100
Effective search space used: 449100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no362_k19.g1 MSMg01no362_k19.g1 CHROMAT_FILE:
MSMg01no362_k19.g1 PHD_FILE: MSMg01no362_k19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:08 2005
(504 letters)
>mm_chr9_107386102_107387005
Length = 904
Score = 975 bits (504), Expect = 0.0
Identities = 504/504 (100%)
Strand = Plus / Plus
Query: 1 ctgaggccacgcccagcccctcactatgaaccccaagtgctgggattatcagcatgtggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgaggccacgcccagcccctcactatgaaccccaagtgctgggattatcagcatgtggc 260
Query: 61 ttgacacccagctcctctgttttcttgtcagtacagtcaaaagtagatacttttattttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgacacccagctcctctgttttcttgtcagtacagtcaaaagtagatacttttattttc 320
Query: 121 ccattttacagggaaggaaaactgaggctcgaaaagctgaaatctctctggaggttcttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccattttacagggaaggaaaactgaggctcgaaaagctgaaatctctctggaggttcttt 380
Query: 181 ctcaaacaaagtccaacccaaaaggctgaggaagcagaggctgagccagcctgatttagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctcaaacaaagtccaacccaaaaggctgaggaagcagaggctgagccagcctgatttagg 440
Query: 241 agtctctcttccttaggtatggcatagtggggaactgactcgcagacccttgtcccagtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtctctcttccttaggtatggcatagtggggaactgactcgcagacccttgtcccagtg 500
Query: 301 gggaggggagctgaagtctgagtggaagcgggcatggtatagatgccctaaataggcagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gggaggggagctgaagtctgagtggaagcgggcatggtatagatgccctaaataggcagg 560
Query: 361 aacatcctgcacggctaccccccccccactcaccctctccagctggtaccaaggctatgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aacatcctgcacggctaccccccccccactcaccctctccagctggtaccaaggctatgt 620
Query: 421 ggtggttgctaggcatctgaagggcccaggtggggcctacctgtcatggagcggctacgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggtggttgctaggcatctgaagggcccaggtggggcctacctgtcatggagcggctacgc 680
Query: 481 agcatgaggtaggcacgaggccca 504
||||||||||||||||||||||||
Sbjct: 681 agcatgaggtaggcacgaggccca 704
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 904
Length adjustment: 10
Effective length of query: 494
Effective length of database: 894
Effective search space: 441636
Effective search space used: 441636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
