NTTCGATCCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTTCGTCTCTTCAGCGCCGTGTCAGTGTGTGGTTATCCGG
AGTTTGTGGAGGATCTGACCATTACCAGAGACTTCACTGGCACTGCAAAG
GCCTTTGCTGACCTGGGGAGGTGTAACGCACTGACCCATTCTCAGTAATT
AAACTAGAGTTTTAGCAATCCTAGTGAGAAGCAAAGCTCACTCTGTTTCT
TCTAGCAACGTCCCTATTGCGAGACACTGCACAGCCCGGGGTGAGGTAGA
GGAGCAAAGGCTGTGTTTTATCTCTAAGCTAAAATAGGGTTGCCATTAAA
CTTGCATGAGATAGGAAATATTTATGGGCATAGGCACTTACATATTGCTT
GTCAGTCTCTGTGACTTTGGGCTTATTATGATATTTTTGGATTTTTTTGG
TACAGAATGGTTGTGGTGTAAATGTTACATATTAAAACCCCCTCTTGAGG
TCATGTTTCGGAGCTAATAATGAAGAGAGCTTGTTACGCAATGAAGAACA
AACTTCCCTCTCAGTACAAAAGGGCTCTCTTATTCCGATGGACTAGAGAA
CCCTTCTTTCTTCCTAAAAATCTCTGTCCTTTGCCTCCTGAAACCCCCGG
ATTCCAGGGGGGACGTGGCTATCCACCCAGGTTTTTATAGGGGGGGTTGG
GGACACCAAAATTCGGGTTTTTTACCCTTTGTGGGTACGCCTTTTAACCC
GTTAAAACTTCCCTTCCTTCTTAG

NTTTTCCGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGACGAATACCGAA
TGGCTGAGAAGCACCTGAAAAAAATGTTCAGCATCTTTAATCATCAGGGA
AATGCAAATCAAAACAGCCCTGAGATTCCATCTCACACCAGTCAGAATGG
CTAAGATCAAAAATTCAGGTGACAGCAGATGCTGTCGAGGATGTGGAGAA
AGAGGAACACTCCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACT
CTGGAAATCAGTCTGGTGGTTTCTCAGAAAATTGGACATAGTACTACCAG
AGGATCCCGAAATACCTCTCCTGGGCATATATCCAGAAGATGTTCCAACT
GGTAAGAAAGACACATGCTCCACTATGTTCATAGCATCCTTATTTATAAT
AGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATAC
AGAAAATATGGTACATTTACACAATGGAATACTACTCAGCTATTAAAAAG
AATAAATTTATGAAATTCCCTAGCCAATGGATTGTCTGGGAGGGCATCAT
CCTGAGTGAGGTACCCCAATCCCAAAATAACTCCCATGAAATGTACTCCC
TGAAAAGTGGAATTAACCCCCAAACTTAAAATACCCCGGTACAAAAATAC
AAGCCCTGGAATTCCCCGGAACGAAAACCAAGGGGGAAAATTTGCCCCTC
TTTAAAATGGA

Query= MSMg01no362_m24.b1 MSMg01no362_m24.b1 CHROMAT_FILE:
MSMg01no362_m24.b1 PHD_FILE: MSMg01no362_m24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:19 2005
         (449 letters)



>mm_chr9_69308079_69308927
          Length = 849

 Score =  845 bits (437), Expect = 0.0
 Identities = 443/445 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcttcgtctcttcagcgccgtgtcagtgtgtggttatccggagtttgtggaggatc 64
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttcgtctcttcagcgccatgtcagtgtgtggttatccggagtttgtggaggatc 264

                                                                       
Query: 65  tgaccattaccagagacttcactggcactgcaaaggcctttgctgacctggggaggtgta 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgaccattaccagagacttcactggcactgcaaaggcctttgctgacctggggaggtgta 324

                                                                       
Query: 125 acgcactgacccattctcagtaattaaactagagttttagcaatcctagtgagaagcaaa 184
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 325 acgcactgacccattctcagtaatcaaactagagttttagcaatcctagtgagaagcaaa 384

                                                                       
Query: 185 gctcactctgtttcttctagcaacgtccctattgcgagacactgcacagcccggggtgag 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gctcactctgtttcttctagcaacgtccctattgcgagacactgcacagcccggggtgag 444

                                                                       
Query: 245 gtagaggagcaaaggctgtgttttatctctaagctaaaatagggttgccattaaacttgc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtagaggagcaaaggctgtgttttatctctaagctaaaatagggttgccattaaacttgc 504

                                                                       
Query: 305 atgagataggaaatatttatgggcataggcacttacatattgcttgtcagtctctgtgac 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atgagataggaaatatttatgggcataggcacttacatattgcttgtcagtctctgtgac 564

                                                                       
Query: 365 tttgggcttattatgatatttttggatttttttggtacagaatggttgtggtgtaaatgt 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tttgggcttattatgatatttttggatttttttggtacagaatggttgtggtgtaaatgt 624

                                    
Query: 425 tacatattaaaaccccctcttgagg 449
           |||||||||||||||||||||||||
Sbjct: 625 tacatattaaaaccccctcttgagg 649


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 449
Length of database: 849
Length adjustment: 10
Effective length of query: 439
Effective length of database: 839
Effective search space:   368321
Effective search space used:   368321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)