Query= MSMg01no362_n10.b1 MSMg01no362_n10.b1 CHROMAT_FILE:
MSMg01no362_n10.b1 PHD_FILE: MSMg01no362_n10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:21 2005
(364 letters)
>mm_chr9_85405580_85406343
Length = 764
Score = 667 bits (345), Expect = 0.0
Identities = 357/361 (98%), Gaps = 2/361 (0%)
Strand = Plus / Minus
Query: 5 gaattcctgccatg-ctacttgttagttgggtgatcctgggtgagttatttaaacacaat 63
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 gaattcctgccatgtc-acttgttagttgggtgatcctgggtgagttatttaaacacaat 558
Query: 64 gcacttctggaatgagggctatgaaagcatcttatttcgaagtgacgtcaggactgggaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 gcacttctggaatgagggctatgaaagcatcttatttcgaagtgacgtcaggactgggaa 498
Query: 124 atagataaagaaagccaaaagttgtggtttccccatcaaagtgttctagatatttgtcca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 atagataaagaaagccaaaagttgtggtttccccatcaaagtgttctagatatttgtcca 438
Query: 184 ttcaccttcatccattcatttatttcttgttggtgctccaagaagtaacttgcacttttt 243
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 437 ttcaccttcatccattcatttatttcttgttggtgctccaagaaataacttgcacttttt 378
Query: 244 tgtatatggtataacatttcatgtagatctgtttttagtctagactattttactcagtac 303
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tgtatatggtatagcatttcatgtagatctgtttttagtctagactattttactcagtac 318
Query: 304 tgcctagggaaagcaagaaagcagatacatctcccttaatgacttcacaataaaaggggt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tgcctagggaaagcaagaaagcagatacatctcccttaatgacttcacaataaaaggggt 258
Query: 364 t 364
|
Sbjct: 257 t 257
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 364
Length of database: 764
Length adjustment: 9
Effective length of query: 355
Effective length of database: 755
Effective search space: 268025
Effective search space used: 268025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no362_n10.g1 MSMg01no362_n10.g1 CHROMAT_FILE:
MSMg01no362_n10.g1 PHD_FILE: MSMg01no362_n10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:21 2005
(429 letters)
>mm_chr9_85226743_85227571
Length = 829
Score = 814 bits (421), Expect = 0.0
Identities = 427/429 (99%)
Strand = Plus / Plus
Query: 1 ttcatcaatgctatcagcctgagttttctggtactgccaaggatgatgataatgccagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 201 ttcatcaatgctatcagcctgagttttctggtactgccaaggatgatgataatgccaact 260
Query: 61 ttccttcctgtgtggacatcttggtgaaacgtgactgtttcaatcggtgttgtaagtacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttccttcctgtgtggacatcttggtgaaacgtgactgtttcaatcggtgttgtaagtacc 320
Query: 121 atgcaccagacgattgtcctttctccagacaagaaaggtgttcagattctacattcatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgcaccagacgattgtcctttctccagacaagaaaggtgttcagattctacattcatat 380
Query: 181 gatgaaatataaatttgaaatgtctgcatgtcgtcttcccagatgccaggcgtggataaa 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 gatgaaatataaatttgaaatgtctgcgtgtcgtcttcccagatgccaggcgtggataaa 440
Query: 241 tgtcctgtgactttgtgctgcagtactttctctctgaatgcttgtactgaaagatattgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtcctgtgactttgtgctgcagtactttctctctgaatgcttgtactgaaagatattgg 500
Query: 301 gcttctctgagataaagatgatgcttgcttaatgggacacatgaaacactgtggaggaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcttctctgagataaagatgatgcttgcttaatgggacacatgaaacactgtggaggaga 560
Query: 361 gaacgaggaactaccacttgatcgaacattctgcctttttaagaggaacacatgcccaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaacgaggaactaccacttgatcgaacattctgcctttttaagaggaacacatgcccaaa 620
Query: 421 tatttgcga 429
|||||||||
Sbjct: 621 tatttgcga 629
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 829
Length adjustment: 9
Effective length of query: 420
Effective length of database: 820
Effective search space: 344400
Effective search space used: 344400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
