Query= MSMg01no363_h07.b1 MSMg01no363_h07.b1 CHROMAT_FILE:
MSMg01no363_h07.b1 PHD_FILE: MSMg01no363_h07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:10 2005
(627 letters)
>mm_chr9_53041097_53042122
Length = 1026
Score = 1100 bits (569), Expect = 0.0
Identities = 603/615 (98%), Gaps = 5/615 (0%)
Strand = Plus / Minus
Query: 16 ggaat--tctctccctgtaccattttcttagttcaagaattgatattctaaattttaatt 73
||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833 ggaattctctctccctgaaccattttcttagttcaagaattgatattctaaattttaatt 774
Query: 74 ttttgtatagtatgttttgttattaggtacacagaacatactacaaatagctattaaaat 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 ttttgtatagtatgttttgttattaggtacacagaacatactacaaatagctattaaaat 714
Query: 134 tacttaaattctgcatgtatgtttaagtgtgagaatattttaatgtaacatttctgaaaa 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 tacttaaattctgcatgtatgtttaagtgtgagaatattttaatgtaacatttctgaaaa 654
Query: 194 tggggtctggagaacaaacatcttttgataaggtgttaataaccacttccatcataaagg 253
|||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct: 653 tggggtctggagaacaaacatcttttgataaggtgttaataatcacttccatcgtaaagg 594
Query: 254 agggagagaagatcagtttatgatagtagcaatactgagt-caaagtcaaatgttgttgg 312
|||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||
Sbjct: 593 agggagagaagatcagtttatgatagtagcaatactga-tccaaagtcaaacgttgttgg 535
Query: 313 cagtggtctgggttttattagagatgtctgcttaggcaaaaagaattcatggttttgatg 372
|||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 534 cagtggtctgggttttattagagatgtctgcttaggcaaacagaattcgtggttttgatg 475
Query: 373 cagaaaatagtttcagcactggatgttacaaagcagtttattaaaagagatgtataatat 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 cagaaaatagtttcagcactggatgttacaaagcagtttattaaaagagatgtataatat 415
Query: 433 agattttcagtatgaggttaagagaaggaggcatccaggaaaaataagatattaaagtgt 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 agattttcagtatgaggttaagagaaggaggcatccaggaaaaataagatattaaagtgt 355
Query: 493 ggctttatgtggttatttgggcttctcaaaggagagtagcacttcattgtctatacaatt 552
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 354 ggctttatgtggttatttgggcttctcaaaggagagtagcacttcgttgtctatacaatt 295
Query: 553 tgggtgatttttgaatttattgtcttcaaagagtttccaaggaacttaatgaggtcacag 612
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 294 tgggtgatttttgaatttattgtcttcaaagagtttccaa-gaacttaatgaggtcacag 236
Query: 613 ggtatttcctaaggt 627
|||||||||||||||
Sbjct: 235 ggtatttcctaaggt 221
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1026
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1016
Effective search space: 626872
Effective search space used: 626872
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no363_h07.g1 MSMg01no363_h07.g1 CHROMAT_FILE:
MSMg01no363_h07.g1 PHD_FILE: MSMg01no363_h07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:10 2005
(466 letters)
>mm_chr9_52835692_52836560
Length = 869
Score = 727 bits (376), Expect = 0.0
Identities = 426/444 (95%), Gaps = 5/444 (1%)
Strand = Plus / Plus
Query: 4 gatctggagtgctgagattagcaccaccatcgcccagctactccttatgttttacaccaa 63
|||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 204 gatctggagtgctgagattagcaccaccatcgcccagctactccttatatttgacaccaa 263
Query: 64 tggataagactaagggactccccagcatcacagaaatagccagtgctgaagacagaattt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 264 tggataagactaagggactccccagcatcacagaaatagccagtgctgaagacagaactt 323
Query: 124 gaattcagatacgtagactacaaaactgtattcaggactatttttcttttgtctctttta 183
||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 324 gaactcagatacgtagactacaaaactgtattcaggactatttttcttttgtctccttta 383
Query: 184 ccaaactaagtatttattggatagtggttgtggcaagaagagtgctaactattgtacata 243
||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 384 ccaaactaaatatttattgaatagtggctgtggcaagaagagtgctaactattgtacata 443
Query: 244 tatgatcatactagacattataatagctttataaagttttccttttttaaacatgtaaag 303
|||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct: 444 gatgatcatactagacattgtaatagctttatgaagttttccttttttaaacatgtaaag 503
Query: 304 aatattttat--att--agtgtttaaattgaaatagaattacaatggttttcccccctcc 359
|||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 504 aatattttatttattttagtgtttaaattgaaatagaattacaatggttt-cccccctcc 562
Query: 360 aacccctcccatgcctcaaatctcaagtcgatagcctctttttctctgattattactatt 419
|||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 aacccctcccatacctccaatctcaagtcgatagcctctttttctctgattattactatt 622
Query: 420 gctattagtattagtattagtatt 443
||||||||||||||||||||||||
Sbjct: 623 gctattagtattagtattagtatt 646
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 869
Length adjustment: 10
Effective length of query: 456
Effective length of database: 859
Effective search space: 391704
Effective search space used: 391704
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
