Query= MSMg01no364_n02.b1 MSMg01no364_n02.b1 CHROMAT_FILE:
MSMg01no364_n02.b1 PHD_FILE: MSMg01no364_n02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:04 2005
(465 letters)
>mm_chr9_111896593_111897458
Length = 866
Score = 839 bits (434), Expect = 0.0
Identities = 455/462 (98%), Gaps = 1/462 (0%)
Strand = Plus / Plus
Query: 5 gaattcagtgtcatgagaactaatcgtttttctactctggctgctcagagtaaccaggga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagtgtcatgagaactaatcgtttttctactctggctgctcagagtaaccaggga 264
Query: 65 cattttgttcaacagcaacgtttggacagattttcagcatcctgtagacagaccaggaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cattttgttcaacagcaacgtttggacagattttcagcatcctgtagacagaccaggaaa 324
Query: 125 -ccccctttggttccctgtagagtcttattaaggcagtcagttaactaaacaaacaaatg 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cccccctttggttccctgtagagtcttattaaggcagtcagttaactaaacaaacaaatg 384
Query: 184 tttaatctataacttccaggataaatgaccaatttagcctgctacagagcataaaagaaa 243
||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 385 tttaatctataacttccagtataaattaccaatttagcctgctacagagcataaaagaaa 444
Query: 244 ccagagacagacaaagagattcatttgtgtaactccatccactgtgggcaaattgatgaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 taagagacagacaaagagattcatttgtgtaactccatccactgtgggcaaattgatgaa 504
Query: 304 atcgcatactcatacttagctcattaatgaagccactgacctctgaagggcaaagacggc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atcgcatactcatacttagctcattaatgaagccactgacctctgaagggcaaagacggc 564
Query: 364 atcagcccaactaagcaaggagtcgaagctatgatgggctggaatgcagctggatgtcag 423
||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 565 atcagcccaactaagcaaggagtcgcagctatgacgggctggaatgcagctggatgtcag 624
Query: 424 agactttgctaatggcatagaaaaatcttgctaagtttgggt 465
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 agactttgctaatggcatagaaaaatcttgctaagtttgggt 666
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 866
Length adjustment: 10
Effective length of query: 455
Effective length of database: 856
Effective search space: 389480
Effective search space used: 389480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no364_n02.g1 MSMg01no364_n02.g1 CHROMAT_FILE:
MSMg01no364_n02.g1 PHD_FILE: MSMg01no364_n02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:04 2005
(370 letters)
>mm_chr9_112037444_112038213
Length = 770
Score = 669 bits (346), Expect = 0.0
Identities = 364/370 (98%)
Strand = Plus / Minus
Query: 1 tctgccaaggagtctgaagtttagctctggtgtatagagcattacttcagttatctaagc 60
||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 570 tctgccaaggagtctgaaggttagctctggtgtatagagcattacttcagtaatctaagc 511
Query: 61 ttgaccagagagaagcagctgaacatctcacaagagtgattggctgggtctgctcacatg 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 ttaaccagagagaagcagctgaacatctcacaagagtgattggctgggtctgctcacatg 451
Query: 121 gggtctggcaattagggtccttgcctcaacatgggaactatggcaaagtggttcctgaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 gggtctggcaattagggtccttgcctcaacatgggaactatggcaaagtggttcctgaag 391
Query: 181 taactgcctgttcttataaagcatatggcccattctcagagcatgggatttgatggagac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 taactgcctgttcttataaagcatatggcccattctcagagcatgggatttgatggagac 331
Query: 241 attctgaaagtaccataagctcgagagaacaaaaaccataatcattttactgaaaaccac 300
||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct: 330 attctgaaagtaccataagttcgagagaacaaacgccataatcattttactgaaaaccac 271
Query: 301 ttgaaagcctaagactgggtacttctaaggggcattttctgaatggctcaggttttattg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 ttgaaagcctaagactgggtacttctaaggggcattttctgaatggctcaggttttattg 211
Query: 361 gtattattgc 370
||||||||||
Sbjct: 210 gtattattgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 770
Length adjustment: 9
Effective length of query: 361
Effective length of database: 761
Effective search space: 274721
Effective search space used: 274721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
