Query= MSMg01no365_h23.b1 MSMg01no365_h23.b1 CHROMAT_FILE:
MSMg01no365_h23.b1 PHD_FILE: MSMg01no365_h23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:01 2005
(442 letters)
>mm_chr9_102274792_102275633
Length = 842
Score = 808 bits (418), Expect = 0.0
Identities = 436/442 (98%)
Strand = Plus / Plus
Query: 1 aacacatgcgtagaaaactccccgtcgagggaaccattacacatatcaaggccagatcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacacatgcgtagaaaactccccgtcgagggaaccattacacatatcaaggccagatcag 260
Query: 61 ccaccaataaaggttgctgagagcattcagaaactatgactgagtttctctctcagatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccaccaataaaggttgctgagagcattcagaaactatgactgagtttctctctcagatgt 320
Query: 121 aatcaacatcgggtataattgaaaacaaatgtttaaaatgtgaaatgttaaaatcgtttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatcaacatcgggtataattgaaaacaaatgtttaaaatgtgaaatgttaaaatcgtttt 380
Query: 181 gaagaaaatattctagaatatgttactgaagccaggatggggtcgggggaggaggtggat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaagaaaatattctagaatatgttactgaagccaggatggggtcgggggaggaggtggat 440
Query: 241 tccctaaaagtatcttaagcagagactgcagagagtacagctagctatgtttagttagaa 300
|||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |
Sbjct: 441 tccctaaaagtatcaaaagcagagactgcggagagtacagctagctatgtttagttagga 500
Query: 301 aaaaagcagaaatgggcaaaaaacaacagaaacaggcaagtgtcacagcaggagaaaata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaaaagcagaaatgggcaaaaaacaacagaaacaggcaagtgtcacagcaggagaaaata 560
Query: 361 cttataccctccttttaaaaaaagaaagtactatcgtccacaatatataaaggatgtcta 420
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttatgccctccttttaaaaaaagaaagtactatcgtccacaatatataaaggatgtcta 620
Query: 421 tgaactaataacaaatatctat 442
||||| ||||||||||||||||
Sbjct: 621 tgaaccaataacaaatatctat 642
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 842
Length adjustment: 9
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no365_h23.g1 MSMg01no365_h23.g1 CHROMAT_FILE:
MSMg01no365_h23.g1 PHD_FILE: MSMg01no365_h23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:01 2005
(438 letters)
>mm_chr9_102421041_102421878
Length = 838
Score = 650 bits (336), Expect = 0.0
Identities = 357/364 (98%), Gaps = 2/364 (0%)
Strand = Plus / Minus
Query: 1 ctaaacactgatggaaaggaatgagggttttgtaaggcttttgtaatactggcc-agctt 59
|||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||
Sbjct: 363 ctaaacactgatggaaaggaatgagggttttggaaggcttttgtaatactggccga-ctt 305
Query: 60 tcccacacatccttccgttggtttctgattccaccaatggggtcaggggtggagaatgcc 119
||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 304 tcccacacatccttctgttggtttctgattccaccaatggggtcagaggtggagaatgcc 245
Query: 120 ctttttactcattcttgccctggttgattgcctacacttcatcttcttcccaacgagagg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 ctttttactcattcttgccctggttgattgcctacacttcatcttcttcccaacgagagg 185
Query: 180 tgttttgtttcaccccttgaatgtaggctggcctcacaagttagtatggctgattagcat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 tgttttgtttcaccccttgaatgtaggctggcctcacaagttagtatggctgattagcat 125
Query: 240 ggggtagaacttgtgttatcattcagtgtctgagtttagccctggagagactttgcaacg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 ggggtagaacttgtgttatcattcagtgtctgagtttagccctggagagactttgcaacg 65
Query: 300 cttgctcccactcttggcatccctgccacagcgctgtgctgtgtgtgcaccagactaagg 359
|| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 64 ctcgctcccactcttggcatccctgccacagtgctgtgctgtgtgtgcaccagactaagg 5
Query: 360 gtga 363
||||
Sbjct: 4 gtga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 838
Length adjustment: 9
Effective length of query: 429
Effective length of database: 829
Effective search space: 355641
Effective search space used: 355641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
