TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTGCTAATAAAGTCCCCTGGGCACTACAAGGGAGTGTTATGATGACCCA
AGGTAAGAGCTACTTTGAATAGAGCAAATATTTGATTCTAGAATTATGAT
CTACTTCCCACAGGTCCCCCTGTTAAGGCTGGGTGCCTTGGACAGACTTC
AGAGCAGTATCATCACACAGGTCAGCCTAAATGAGAATTCTTGGTCAGCA
CAAGAACTCCCCAAATGAGAGGCAACTTCTAGTGGACAGGCTCTGTCTTA
GCATTGTGTCCTGTTACTGTGATCAAATAACATGACAAAAACAACTAGGG
AGGGGGATAAAGAAATGTTTTAGCTGCTAAGTCACAGGTCACCAGACTGG
GGCAGTATGAACTTGAAGCAGTTGGTCACATCAGATCCACAGTCAAGAGC
AGAGGATGATAAATAAATGTATGCATGCTCTTGTTCAACTCAATCTCTAC
TCCTACAGTCTTGGATTCCTTTTCCAGGGGATAGTACTACCCACAGTATG
TGGGTCCCCCACCTCAATTAACATAATAAAGATAACCCTCTACAAACTTG
ACCACAGGCCCACCTGAAGTAGACAACCTGCTGAGACTGCTAAGTTGACA
ACTAAAAGTAACCATCATAGCTCCCATAGATGCAGACTTCAAGGTCATGA
CCTTCTGAAGGTTGTATGGACCTTGTAAGCTGTTATTCTCTN

CATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCTGATCTTTCCAAAACTTTTATCAT
GAATGGGTGTTGGATCTTGTCAAATGCTTTTTCTGCATCTAACGAGATGA
TCATGTGGTTTTTGTCTTTGAGTTTGTTTATATAATGGATTACATTGATG
GATTTTCATATATTAAACCATCCCTGCATCCCTGGAATAAAACCTACTTG
GTCAGGATGGATGATTGCTTTAATGTGTTCTTGGATTCGGTTAGTGAGAA
TTTTATTGAGGATTTTTGCATCGATATTCATAAGAGAAATTGGTCTGAAG
TTCTCTATCTTTGTTGGGTCTTTCTGTGGTTTAGGTATCAGAGTAATAGT
GGCTTCATAAAATGAGTTGGGTAGAGTACCTTCTACTTCTATTTTGTGAA
ATAGTTTGTGCAGAACTGGAATTAGATCTTCTTTGAAGGTCTGATAGAAC
TCTGCACTAAACCTGTCTGGTCCTGTGCTTTTTTTTTTTTGGCTGGGAAA
CTATTAATAACTGCTTCTATTTCTTTAGGGGATATGGGACTGTTTAGATG
GTCAACTTGATCCTGATCCAACCTCGGCACCTGGTATCTGTCCAGAAATT
TGTCCATTTCGCCCAGGTTTTCCAGCTTTGGCTAGAATATCCCTCTTGGA
CCAGGATCCGGCGCCGGCTTCGGAATTTCTTCATATTTTTGTTGTTCTTC
CCCCCCTTTCTATTTT

Query= MSMg01no365_n02.b1 MSMg01no365_n02.b1 CHROMAT_FILE:
MSMg01no365_n02.b1 PHD_FILE: MSMg01no365_n02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:25 2005
         (619 letters)



>mm_chr9_113163123_113164141
          Length = 1019

 Score = 1135 bits (587), Expect = 0.0
 Identities = 608/615 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctgctaataaagtcccctgggcactacaagggagtgttatgatgacccaaggtaa 64
           |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgctaagaaagtcccctgggaactacaagggagtgttatgatgacccaaggtaa 264

                                                                       
Query: 65  gagctactttgaatagagcaaatatttgattctagaattatgatctacttcccacaggtc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gagctactttgaatagagcaaatatttgattctagaattatgatctacttcccacaggtc 324

                                                                       
Query: 125 cccctgttaaggctgggtgccttggacagacttcagagcagtatcatcacacaggtcagc 184
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cctctgttaaggctgggtgccttggacagacttcagagcagtatcatcacacaggtcagc 384

                                                                       
Query: 185 ctaaatgagaattcttggtcagcacaagaactccccaaatgagaggcaacttctagtgga 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctaaatgagaattcttggtcagcacaagaactccccaaatgagaggcaacttctagtgga 444

                                                                       
Query: 245 caggctctgtcttagcattgtgtcctgttactgtgatcaaataacatgacaaaaacaact 304
           ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cagcctctgtcttagctttgtgtcctgttactgtgatcaaataacatgacaaaaacaact 504

                                                                       
Query: 305 agggagggggataaagaaatgttttagctgctaagtcacaggtcaccagactggggcagt 364
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 505 agggagggggataaagaaatgttttagctgctaagtcacaggtcaccggactggggcagt 564

                                                                       
Query: 365 atgaacttgaagcagttggtcacatcagatccacagtcaagagcagaggatgataaataa 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 atgaacttgaagcagttggtcacatcagatccacagtcaagagcagaggatgataaataa 624

                                                                       
Query: 425 atgtatgcatgctcttgttcaactcaatctctactcctacagtcttggattccttttcca 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 atgtatgcatgctcttgttcaactcaatctctactcctacagtcttggattccttttcca 684

                                                                       
Query: 485 ggggatagtactacccacagtatgtgggtcccccacctcaattaacataataaagataac 544
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ggggatagtaccacccacagtatgtgggtcccccacctcaattaacataataaagataac 744

                                                                       
Query: 545 cctctacaaacttgaccacaggcccacctgaagtagacaacctgctgagactgctaagtt 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 cctctacaaacttgaccacaggcccacctgaagtagacaacctgctgagactgctaagtt 804

                          
Query: 605 gacaactaaaagtaa 619
           |||||||||||||||
Sbjct: 805 gacaactaaaagtaa 819


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1019
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1009
Effective search space:   614481
Effective search space used:   614481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)