CAATATTTGCNNCCGCTATACGACTCCCTATTTTCAGNAGGATCGCGNAA
TTCTACCCTCTCGCCAAGATAAGCCTAAGAGAGACTTAAGCAGTGGTTGA
GCAGTGAGTGGGAGTTGCAGGACTAGGGAGGACCAAGAAAAAAGTAAGGA
AGGGGAAAANNAAAGGGGGGGGGTTTTTTNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTNNNTTNNNNNNN
NNNNNNNNNTTTTTNTTTTTTTTTTTTTTTTTTTTTTCCCCCGGTCNNNN
NNNTNCNNTTCCNCNCNCCCCNNNCCCCCCCNCCCCCCCCCCNNCTCCCC
TTTCCCCCCCTCCCCCCTTCTTCCTTTTTCCCCTCTTTCCCCCCCCCNCC
CCCCCCCCCTCCCCCCCCTCCCCCCCCCCTCCCCCCTTCCNCTCCCCCCC
CCCCCCCCCCCTTTTTTTTTTCCCCCNCCTTCCCCCTCNCTCCCCTCCNC
TTCTTTCCNTCCTTTTTTTCTCCTCTTTTTCTCCCTTTTCCCNCCCTTCC
CCNCCACCTCTTTCCCCCCTCTCTTTCCTCCCCTCTTTCTTTTTCTTTTT
TTCTCTCTCTTCTTTATCCTTTTTTCTCCTTTTTTCTTTTTTTCCTTTCT
CTCTTTCCTTCTTTTTCCCCCTTTTTCCTTTTCCTTCTTTTCTCCTCTTT
CTCCGCTTTTTGTTTGTTTGTTG

NNCCGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCTGTTGAGAAGTAGTTTTATGAAAG
AGATATATCTGTAAGGTGAGGATGGTGTCTCTCTGATGTCTGCTCCAGGC
AAGCTTCAGAGAGGAGATTAGTTGAAGAGGCAGCAGGTGTTGGGGGATGC
TGGCATGCGTTCTGTGTGTAACAGATGCTTATGGGCACTCTTTGAGCCCT
GAATTGGGAATGATATGAATAGGAGGAAAAGAGAGGAAAGAGACAAAGAG
AGATTTTGCTGAGTTCTTACAAAACTAGTCAAGGCAAGGCAAGGCAACAG
AAGAACAAGGGCCAGGACACCTAGGGAGATCCAGGCCGAGGAGACCCACC
ACATATCTTCTGACAGATGGGAACAAATGTGGAGAGGCACAGGTAAAGCA
AGAGAAAGACAGAATAATCTCAGCCTGGCAACTGGACCTGATATGACACA
CATGACTGAGAGCAGAGAGGAGACTCCAGAGATGAGTGGGCAGCTGGAGC
AATGCCCAGGGAAGCTCTGTACATAAAACAAGCTAGGTGAATCTTATCTA
AACCGAGATGCTTAGATGGATGGCACCTTGCGCCTTATTTAAGTTGCTGA
GTAAGGCCCTTCTTCTGCCCGAGGAACTCTTTGACTGTCTTCCTGGTTGC
TGGGAGATAAAACTCCTCGTTTTTCTTCCTGGGGAATTTCTCNAAGTTCC
CGTTGTTCCN

Query= MSMg01no366_m20.g1 MSMg01no366_m20.g1 CHROMAT_FILE:
MSMg01no366_m20.g1 PHD_FILE: MSMg01no366_m20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:45 2005
         (481 letters)



>mm_chr9_29788633_29789511
          Length = 879

 Score =  911 bits (471), Expect = 0.0
 Identities = 478/481 (99%), Gaps = 2/481 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctgttgagaagtagttttatgaaagagatatatctgtaaggtgaggatggtgtctctctg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgttgagaagtagttttatgaaagagatatatctgtaaggtgaggatggtgtctctctg 260

                                                                       
Query: 61  atgtctgctccaggcaagcttcagagaggagattagttgaagaggcagcaggtgttgggg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgtctgctccaggcaagcttcagagaggagattagttgaagaggcagcaggtgttgggg 320

                                                                       
Query: 121 gatgctggcatgcgttctgtgtgtaacagatgcttatgggcactctttgagccctgaatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatgctggcatgcgttctgtgtgtaacagatgcttatgggcactctttgagccctgaatt 380

                                                                       
Query: 181 gggaatgatatgaataggaggaaaagagaggaaagagacaaagagagattttgctgagtt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggaatgatatgaataggaggaaaagagaggaaagagacaaagagagattttgctgagtt 440

                                                                       
Query: 241 cttacaaaactagtcaaggcaaggcaaggcaacagaagaacaagggccaggacacctagg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttacaaaactagtcaaggcaaggcaaggcaacagaagaacaagggccaggacacctagg 500

                                                                       
Query: 301 gagatccaggccgaggagacccaccacatatcttctgacagatgggaacaaatgtggaga 360
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 501 gagatccaggccgaggagacccaccacatatcttctgacagacgggaacaaatgtggaga 560

                                                                       
Query: 361 ggcacaggtaaagcaagagaaagacagaataatctcagcctggcaactggacctgatatg 420
           ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||
Sbjct: 561 ggcacaggtaaagcaagagaaagaca--ataatctcagcctggcaactggacctgatatg 618

                                                                       
Query: 421 acacacatgactgagagcagagaggagactccagagatgagtgggcagctggagcaatgc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 acacacatgactgagagcagagaggagactccagagatgagtgggcagctggagcaatgc 678

            
Query: 481 c 481
           |
Sbjct: 679 c 679


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 879
Length adjustment: 10
Effective length of query: 471
Effective length of database: 869
Effective search space:   409299
Effective search space used:   409299
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)