CTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCTCTAAGTCCGTTTTCTATTTTCGGAGATGTAACTGGATCCCCAC
CAGACTTCGGCTATTATCTTAAAAACAAGGGGAAAGACTACTGTCCATTC
GTGACTGGGACGCGAGAAAGCGCCTCCCCAGCCTGTGGTTTTCCTTCCTT
ACCTATGCTGGAAGGAGAAGATGCAGGTAAAGGCTGTAAGGGTAGGAAGG
ACAAAGGAAGACAGAAAAAAAAAAAAAAGAGGTTGTATCCACGAACCATG
TTCATGGATACAACCATGTACTCTGGTGCTTGATTCATACACCTCACTAA
GCAAAAATAAGCAAATACAAGTCTCACACATTGTACATATATAAGCATAC
CTGGGTTTCTGAACAGCACACTTGCGCAGTATCACGTGTGTCTTAAGAAC
AGATTTTTGCCCCGTGCCTTCCACGCGTGACACTTGTGCACGCAACAGTC
CCCAAAGCCCCTCAGTAACATCCTCGTCTGTGTCCAAGCCAGAGTACAAG
GGATACCACTTGATCTTTAAAACACACACCCAAATTGTGGGATTGCTAGG
TGAGTTCCAAGGGAGAAAGCTGGTCCCTACTTCCACCTCATCCAAGAAAA
CCGAATCGTCTTATGTCCGTGAGCGGTACTCCTTGGGTGGCTTCTTCTCG
GGAACCCCTTCTCCGTCCTCATTGTTGTTCACATAGTCTTTAGGTAACAA
CCTGTCCTAAATTTTTTTTTTTCTTTTGTTCCCATTTTTGG

CGATTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTTCCTTGTCTATTTTCTTTAATTTT
GTTGTTTTGTTTGCTTGCTTTTGTTTTTTTAAGTTAGGGTTTCTCTGTGA
GCTCTGGCTGTATTAGAACTCCATCCATCTGTTGACCTAGTTGGCTTCAA
ACTCTGAGATTCTCCTCCCTTTGCCTCTTGAGTATTGGGATTAAAGACAT
ACACCATCATAGCCATAAAATTTTTTAAAAATTTAAATATATGTATGTAT
GATGTCACATGTGTCCCAGTTCTCTAAGAGTCCAGAGGTTTTGAACCCCT
TGGAGCTGGAGTTACAGGCCATGGAAGGCCACCCTGCTTGGGTGCTGGTG
ATGTAATTCAAGTCCTTTGGAACGGCAGCAAGTGCTCTTACCCACAGACC
CGTCTTTCCATCCCACCTACCTTGTCTGTTTTCTCAATAAAGTAATGTGT
GGTAATTTTTCTTGCTTAAATGTTTGAGAGAATTTACTTCAGACTATCTC
ATCCTTGATTTTTCTTTGTGAGAAGGGTGGTGGTAGCACACGCCTTTTAT
CCCAGCATTGGGAATGCAAAGGCAGGGCTTTGAAACCCGTTTTGATCTTG
ATTGAGTTCCTCAAATAAACACGGCTTACCCCAAATAAAATTTTTCTTGA
ATAGGATTGTTAAGGGGTATAGTAAAGGGGGAATGTTAATTTTGAATCCC
TTAATCTTTTTTTTTCCCGCCTTTTGTTCTTCTGTTGATTN

Query= MSMg01no367_f12.b1 MSMg01no367_f12.b1 CHROMAT_FILE:
MSMg01no367_f12.b1 PHD_FILE: MSMg01no367_f12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:28 2005
         (492 letters)



>mm_chr9_98854266_98855161
          Length = 896

 Score =  915 bits (473), Expect = 0.0
 Identities = 487/493 (98%), Gaps = 4/493 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcctctaagtccgttttctattttcggagatgtaactggatccccaccagacttc 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcctctaagtccgttttctattttcggagatgtaactggatccccaccagacttc 263

                                                                       
Query: 64  ggctattatcttaaaaacaaggggaaagactactgtccattcgtgactgggacgcgagaa 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ggctattatcttaaaaacaaggggaaagactactgtccattcgtgactgggacgcgagaa 323

                                                                       
Query: 124 agcgcctccccagcctgtggttttccttccttacctatgctggaaggagaagatgcaggt 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agcgcctccccagcctgtggttttccttccttacctatgctggaaggagaagatgcaggt 383

                                                                       
Query: 184 aaaggctgtaagggtaggaaggacaaaggaagacag---aaaaaaaaaaaaaagaggttg 240
           || |||||||||||||||||||||||||||||||||   |||||||||||||||||||||
Sbjct: 384 aacggctgtaagggtaggaaggacaaaggaagacaggaaaaaaaaaaaaaaaagaggttg 443

                                                                       
Query: 241 tatccacgaaccatgttcatggatacaaccatgtactctggtgcttgattcatacacctc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tatccacgaaccatgttcatggatacaaccatgtactctggtgcttgattcatacacctc 503

                                                                       
Query: 301 actaagcaaaaataagcaaatacaagtctcacacattgtacatatataagcatacctggg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 actaagcaaaaataagcaaatacaagtctcacacattgtacatatataagcatacctggg 563

                                                                       
Query: 361 tttctgaacagcacacttgcgcagtatcacgtgtgtctt-aagaacagatttttgccccg 419
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 564 tttctgaacagcacacttgcgcagtatcacgtgtgtctttaagaacagatttttgccccg 623

                                                                       
Query: 420 tgccttccacgcgtgacacttgtgcacgcaacagtccccaaagcccctcagtaacatcct 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 624 tgccttccacgcgtgacacttgtgcacgcaacagtccccaaagcccctcagcaacatcct 683

                        
Query: 480 cgtctgtgtccaa 492
           |||||||||||||
Sbjct: 684 cgtctgtgtccaa 696


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 896
Length adjustment: 10
Effective length of query: 482
Effective length of database: 886
Effective search space:   427052
Effective search space used:   427052
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)