Query= MSMg01no367_h11.b1 MSMg01no367_h11.b1 CHROMAT_FILE:
MSMg01no367_h11.b1 PHD_FILE: MSMg01no367_h11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:38 2005
(437 letters)
>mm_chr9_89530064_89530898
Length = 835
Score = 803 bits (415), Expect = 0.0
Identities = 428/433 (98%), Gaps = 2/433 (0%)
Strand = Plus / Minus
Query: 5 gaattcttttctatttctgaaaatgtagagcaagcacacagcaggtccaaagggcaggaa 64
||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 635 gaattcttttctatttctgaaaatgtagagcaagcacacagcaggcccaaagggcaagaa 576
Query: 65 gccatgtttttgtcaggcagaatcctgattagcaggcagtttggggtggtggtttgggtc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 gccatgtttttgtcaggcagaatcctgattagcaggcagtttggggtggtggtttgggtc 516
Query: 125 aaaagcctatccctggtagacaaaaattcacatgctggaaatggtttgcagggtcttgca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 aaaagcctatccctggtagacaaaaattcacatgctggaaatggtttgcagggtcttgca 456
Query: 185 acatagctgtttctgaaagactctgaatactaggttattggtgctgttcacaaagtttat 244
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 455 acatagctgtttctgaaaga--ctgaatactaggttattggtgctgttcacaaagtttat 398
Query: 245 ctgcacacctcatgaagttatgcagtatgaacaaagcatttgttctagtcacagaattat 304
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 397 ctgcacacctcatgaagttatgcagtacgaacaaagcatttgttctagtcacagaattat 338
Query: 305 catatatttaagatccatgttgtccaacttgatgagttacttttctgtaatgccaagaat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 catatatttaagatccatgttgtccaacttgatgagttacttttctgtaatgccaagaat 278
Query: 365 aagtgtagcaactggatagaggtaggattcaccctgtgattctcctttgagcttcaagga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 aagtgtagcaactggatagaggtaggattcaccctgtgattctcctttgagcttcaagga 218
Query: 425 cagctaggctaag 437
|||||||||||||
Sbjct: 217 cagctaggctaag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 835
Length adjustment: 9
Effective length of query: 428
Effective length of database: 826
Effective search space: 353528
Effective search space used: 353528
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no367_h11.g1 MSMg01no367_h11.g1 CHROMAT_FILE:
MSMg01no367_h11.g1 PHD_FILE: MSMg01no367_h11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:38 2005
(356 letters)
>mm_chr9_89356199_89356954
Length = 756
Score = 671 bits (347), Expect = 0.0
Identities = 353/355 (99%)
Strand = Plus / Plus
Query: 1 ttgctcgctctctctttctcgtttgccatgagatacacacaggaggcagatgtcacatcc 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgctcgctttctctttctcgtttgccatgagatacacacaggaggcagatgtcacatcc 260
Query: 61 atcactctagcaaagattcctgcatgaaaatgttcactatgtgtagctgagaagggtcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atcactctagcaaagattcctgcatgaaaatgttcactatgtgtagctgagaagggtcaa 320
Query: 121 cattccctgatgtcagtaccaactctggcaacagtggcctgttttctgcaacaagcctga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cattccctgatgtcagtaccaactctggcaacagtggcctgttttctgcaacaagcctga 380
Query: 181 aaaccaaggaatcctagaggcagttagcatcagcagcgacacagcaatgcctgtttgaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaccaaggaatcctagaggcagttagcatcagcagcgacacagcaatgcctgtttgaaa 440
Query: 241 taagagagtgcatgtgaacctataaaatggaaaccatggcttatttctgaaggcttcctt 300
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 441 taagagagtgcatgtgaacctataaaatggaaaccagggcttatttctgaaggcttcctt 500
Query: 301 aacttcactttggtgaggagaagaggtacagggtaggggagagggaggaggagga 355
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aacttcactttggtgaggagaagaggtacagggtaggggagagggaggaggagga 555
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 356
Length of database: 756
Length adjustment: 9
Effective length of query: 347
Effective length of database: 747
Effective search space: 259209
Effective search space used: 259209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
