NCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTCTGATCCCAAGACTAGTTACTGTTTGCTGACCCTTAGCTCTAA
GAACATTTTTAGTTGTGTTTTAAGTTTCTGAGTCACAAATAAATGTACCA
ATAGAATCACCCATGCCTCAACTGAGGCATAGTTATGGACATCTAGACAG
GGAAGACTGAAAAAACATAAAGGAAATTCATGGATAATAGCTCTGCCCTC
TTTCATTAGTCATATCTTTCTGATGAATTTTTTTTTACTATTTTTTATTA
CAACCAAGTAAAAATGTGAAGTTTATAAACTGCTTTAAGACAGTGTTTCT
CCTTTCTTCTTCCTTGCTCTTATGTCCACTTTGCCTACGGTGCCTATGTT
TATGCCTGATCTGCTGGCTTAATCAACAGTGCGCTTTTTCCTTCTAAACG
TCTCTCTATAATAAACTGCACAATAACCTCATTCAAATAAAAACATTAGA
TACCAAAAAAACATTAGATATCACTGCACTAAACATTTAATTAAAGATAT
AAAGCATCTTTTTCAGATTCCTATCCAGAACAAATGAATTTGAGAAACAC
ATCATCTGCAGTCATGCTTGTAAAGAATATATATAGATTATTCTGTGGAC
AATTGTCTACTATTAAACATACCCAATGGGGTGGTTTTTTTATTAATCCC
CGGAATCCATATGGTTCTGAGAACCCCCTTCCAAGGGAGGTTTTATAGAC
AACCCATTATTATTGTTTCTGGAAGG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXTCACCTGAGGAATACCGAATGGCAGAGAAGCACTTGAAAAAATG
TTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGAT
TCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGC
AGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTG
GGAGTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCA
GAAAACTGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGGC
ATATATCCAGAAGATGCCCCAACAGGTAAGAAGGACACATGCTCCACTAT
GTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCTAGAT
GCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACACAATG
GAGTACTACTCAGCTATTANNAAGAATGAATTTATGAAATTCCTAGCCAA
ATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGGAACACATTCACAAA
GAAACTCACACAATATGTATTCACTGGATAAGGGGATATTAGCCCCCAAC
CTAGGATACCCACGATATAAAAAATAATTTGCTAAACCACTTGAAATCTT
CAAAAAAGAAAAATTTAGTGGTGGGCCCCATGGCCCTCCTTAAATATTTT
AAAAAAAACAC

Query= MSMg01no367_i16.b1 MSMg01no367_i16.b1 CHROMAT_FILE:
MSMg01no367_i16.b1 PHD_FILE: MSMg01no367_i16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:44 2005
         (540 letters)



>mm_chr9_4563728_4564670
          Length = 943

 Score =  897 bits (464), Expect = 0.0
 Identities = 521/540 (96%), Gaps = 5/540 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctctgatccc-aagactagttactgtttgctgacccttagctctaagaacatttt 63
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 gaattctctgatcccaaagactagttactgtttgctgacccttagctctaagaacatttt 684

                                                                       
Query: 64  tagttgtgttttaagtttctgagtcacaaataaatgtaccaatagaatcacccatgcctc 123
           |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 683 tagttgtgttttaactttctgagtcacaaataaatgtaccaatagaatcacccatgtctc 624

                                                                       
Query: 124 aactgaggcatagttatggacatctagacagggaagactgaaaaaacataaag-gaaatt 182
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 623 aactgaggcatagttatggacatctagacagggaagactgaaaaaacat-aagagaaatt 565

                                                                       
Query: 183 catggataatagctctgccctctttcattagtcatatctttctgatgaa-ttttttttta 241
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 564 catggataatagctctgccctctttcattagtcatatctttctgatgaatttttttttta 505

                                                                       
Query: 242 ctattttttattacaaccaagtaaaaatgtgaagtttataaactgctttaagacagtgtt 301
           || ||||||||||||||||||||  ||| |||||||||||||||||||||| ||||||||
Sbjct: 504 cttttttttattacaaccaagtaggaatttgaagtttataaactgctttaacacagtgtt 445

                                                                       
Query: 302 tctcctttcttcttccttgctcttatgtccactttgcctacggtgcctatgtttatgcct 361
           | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 444 tatcctttcttcttccttgctcttatgtccactttgcctacagtgcctatgtttatgcct 385

                                                                       
Query: 362 gatctgctggcttaatcaacagtgcgctttttccttctaaacgtctctctataataaact 421
           ||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||
Sbjct: 384 gatctgctggcttaatcaacagtgcacttttaccctctaaacgtctctctataataaact 325

                                                                       
Query: 422 gcacaataacctcattcaaataaaaacattagata-ccaaaaaaacattagatatcactg 480
           ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 324 gcacaataacctcattcaaataaaaacattagatatccaaaaaaaaattagatatcactg 265

                                                                       
Query: 481 cactaaacatttaattaaagatataaagcatctttttcagattcctatccagaacaaatg 540
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 264 cactaaacatttaattaaagatataaagcatccttttcagattcctatccagaacaaatg 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 540
Length of database: 943
Length adjustment: 10
Effective length of query: 530
Effective length of database: 933
Effective search space:   494490
Effective search space used:   494490
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)