Query= MSMg01no367_i24.b1 MSMg01no367_i24.b1 CHROMAT_FILE:
MSMg01no367_i24.b1 PHD_FILE: MSMg01no367_i24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:46 2005
(458 letters)
>mm_chr9_84180025_84180882
Length = 858
Score = 806 bits (417), Expect = 0.0
Identities = 445/455 (97%), Gaps = 3/455 (0%)
Strand = Plus / Plus
Query: 7 gaattcttgggcttgcacctgta--tgtctttctggcaaccttggtcccctcccactgtc 64
||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcttgggcttggatctgtagatgtctttctggcaaccttggtcccctcccactgtc 263
Query: 65 cggatgaatagaacccagaaagtacattgatgtatgggctgtcggttttctagatttttt 124
| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cagatgaatagaacccagagagtacattgatgtatgggctgtcggttttctagatttttt 323
Query: 125 t-ctattctgcttttttttttcaaatatagacttttttccgtttaaatctcatttcttct 183
| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 324 ttctattctgcttttttttttcaaatatagacttttttccatttaaatctcatttcttct 383
Query: 184 cttatttcactatgttgggacaaaggaggcagtcatcccttgagtactttgtatctcgtt 243
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 384 cttatttcactatgttgggacaaaggaggcagtcatcccttgagtactttgtatcttgtt 443
Query: 244 ggtcactagatatccatcccagttcatcttcagagttctgacttccaggaaatccaggac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ggtcactagatatccatcccagttcatcttcagagttctgacttccaggaaatccaggac 503
Query: 304 cacaaatagaacatcactgttttgttttgttttgtttttgtttttccctctcaactctga 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cacaaatagaacatcactgttttgttttgttttgtttttgtttttccctctcaactctga 563
Query: 364 gtacaggatgacattcattttatttcttaataatgtccctactctttcaaagtacgatcc 423
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gtacaggatgaccttcattttatttcttaataatgtccctactctttcaaagtacgatcc 623
Query: 424 caattagagagacctgtattatgtatttctaccca 458
|||||||||||||||||||||||||||||||||||
Sbjct: 624 caattagagagacctgtattatgtatttctaccca 658
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 858
Length adjustment: 10
Effective length of query: 448
Effective length of database: 848
Effective search space: 379904
Effective search space used: 379904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no367_i24.g1 MSMg01no367_i24.g1 CHROMAT_FILE:
MSMg01no367_i24.g1 PHD_FILE: MSMg01no367_i24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:46 2005
(459 letters)
>mm_chr9_84357995_84358853
Length = 859
Score = 872 bits (451), Expect = 0.0
Identities = 457/459 (99%)
Strand = Plus / Minus
Query: 1 ttccttagtcaattgcaaaaggggagaagaagtcattggggagagacaagacttcatatc 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 659 ttccttagtcaattgcaaaaggggagaagaagccattggggagagacaagacttcatatc 600
Query: 61 catcctgttgactgagtaagcctttggcagtactgtatatcgtatgtcccttgacatttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 catcctgttgactgagtaagcctttggcagtactgtatatcgtatgtcccttgacatttc 540
Query: 121 ctctagtatttgataaaacctagcattcctaatatattagtagacttacaatgcagttga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 ctctagtatttgataaaacctagcattcctaatatattagtagacttacaatgcagttga 480
Query: 181 gtttttcaggttgtaaagaaaaagtagaattgtgtttcaataaatattctaacaaagttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 gtttttcaggttgtaaagaaaaagtagaattgtgtttcaataaatattctaacaaagttt 420
Query: 241 attttgttcctttgaaaatacatggatctccactgacaaaatttggaaaatatctagaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 attttgttcctttgaaaatacatggatctccactgacaaaatttggaaaatatctagaca 360
Query: 301 ggagactaacaattactgaatttcaactgtcatctagatattttatttatgcacttctca 360
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 359 ggagactaacaattactgaatttcaactgtcatccagatattttatttatgcacttctca 300
Query: 361 gtctgcccagtagtcaagcatgttttcattaacaggagaaaaagtgaagctttgagttgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 gtctgcccagtagtcaagcatgttttcattaacaggagaaaaagtgaagctttgagttgt 240
Query: 421 aaaatagtttataaaaatctaatgacatgaacaaacaac 459
|||||||||||||||||||||||||||||||||||||||
Sbjct: 239 aaaatagtttataaaaatctaatgacatgaacaaacaac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 859
Length adjustment: 10
Effective length of query: 449
Effective length of database: 849
Effective search space: 381201
Effective search space used: 381201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
