NNGGTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTATCAGTCCCCCAAAGAAGACCTAATTCCAGTTCTCCTTA
AACTATTCCATAAAATAGAAACAGAAGATACTCTACCCAATTCATTCTAC
AAAGCCACAATTACTCTGATACCTAAACCACATAAAGACCCAACAAAGAT
CGAGAACTTCAGACCAATTTCTCTTATGAATATCGATGAAAAAATACTCA
ATATAATCCTCGCAAATTGAATCCAACACATCAAAATGATCATCCATAAT
GACCAAGTAGGCTTCATCCCAGGGATACTTGTATGGTTTAATATACGGAA
ACCCATCAGCGTAATCCACTGTATCAATGTAATCCACTATATAAACAAAC
TCAAAGACAAAAACCACATGATCATCTCATTAGATGCTTAGAAAGCATTT
GAAAAGTCATGGAAATATCAGGAATTCAACGTCCATACCTAAACATAATA
AAAGCAATATACAGCAAACCAGTAGCCAACATCAAACTAAATGGAGAGAA
ACTTGAAGCAATCCCACTAAAATAAGGGACTACACAAGGCTGCCCACTTT
CTCCCTACCTATTCAATATAGCACTTGAAATCCTAGNCAGAGCAATTTGA
CAACAAAAGTAGACCACAGGGAGACAAATTGGAAAGGAAGAAGTCCAATA
TCACTATTTGCCGATGATATGATAGTATAATAAGTGACCCCTAATATTCC
CCCAGAGAATCC

CCAATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCTTAGTGGCTATATCACTTTGCACT
CCAACAGAGAATATGTGTTGCTTTTCCCCGGTGCCACTCCACCATTAATA
ATCATCTGTGTTAATAACCTTCATTATTCTGCATGAAATAAAATAAAATC
TTAAAGTTGTTTTAATTATCATTTCCCTGATGGCTAATGGTGTTGGACAT
TGTAAACATATTTCTCAATTATTAGTATTTTATCCTTTGAGAACACTTCA
TTTAGTTCTATGCCATAATTTTAATTGGATTGTTCTTTTTTTACTTTGTT
ATAGAAAAAAGAGCTTGTTAAATAAATAAAGAACATCATACACAAAAATT
AACCAGCTCCAAAGACCGTGCAATATAATGAACTTACAAGCAATTACAAT
TGACACTCCAAAATGGGATCTGTGAAGCTTGTGCTATATTTATGCATTTA
TCCACACCAAAACAAAACAAAACAAAATCTATGACAGAATTAGAAGTAGA
AAAACGTATGCCTGCATTCAGTTCTTCTGTAGTGCCTCATATTTAGCTTT
CCTTGTTCCCTTTTGTTCGCTGTATACTGTACCCAAAAAAGTACAGTATA
TATAAGTACAGTATATATATATATAATCTAGCCATATATATATATGGCTA
GATTCCCCACACCAATGAGAACCGGTGCCTTGTTCTTTCTGAAAGGTGGA
GACTTCTCTTATATN

Query= MSMg01no367_n13.g1 MSMg01no367_n13.g1 CHROMAT_FILE:
MSMg01no367_n13.g1 PHD_FILE: MSMg01no367_n13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:07 2005
         (573 letters)



>mm_chr9_89648585_89649557
          Length = 973

 Score = 1087 bits (562), Expect = 0.0
 Identities = 571/574 (99%), Gaps = 1/574 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   cttagtggctatatcactttgcactccaacagagaatatgtgttgcttttccccggtgcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 cttagtggctatatcactttgcactccaacagagaatatgtgttgcttttccccggtgcc 259

                                                                       
Query: 61  actccaccattaataatcatctgtgttaataaccttcattattctgcatgaaataaaata 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 260 actccaccattaataatcatctgtgttaataaccttcattattctgcatgaaataagata 319

                                                                       
Query: 121 aaatcttaaagttgttttaattatcatttccctgatggctaatggtgttggacattgtaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aaatcttaaagttgttttaattatcatttccctgatggctaatggtgttggacattgtaa 379

                                                                       
Query: 181 acatatttctcaattattagtattttatcctttgagaacacttcatttagttctatgcca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 acatatttctcaattattagtattttatcctttgagaacacttcatttagttctatgcca 439

                                                                       
Query: 241 taattttaattggattgttctttttttactttgttatagaaaaaa-gagcttgttaaata 299
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 440 taattttaattggattgttctttttttactttgttatagaaaaaaagagcttgttaaata 499

                                                                       
Query: 300 aataaagaacatcatacacaaaaattaaccagctccaaagaccgtgcaatataatgaact 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aataaagaacatcatacacaaaaattaaccagctccaaagaccgtgcaatataatgaact 559

                                                                       
Query: 360 tacaagcaattacaattgacactccaaaatgggatctgtgaagcttgtgctatatttatg 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tacaagcaattacaattgacactccaaaatgggatctgtgaagcttgtgctatatttatg 619

                                                                       
Query: 420 catttatccacaccaaaacaaaacaaaacaaaatctatgacagaattagaagtagaaaaa 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 620 catttatccacaccaaaacaaaacaaaacaaaatctatgacagaattagaactagaaaaa 679

                                                                       
Query: 480 cgtatgcctgcattcagttcttctgtagtgcctcatatttagctttccttgttccctttt 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 cgtatgcctgcattcagttcttctgtagtgcctcatatttagctttccttgttccctttt 739

                                             
Query: 540 gttcgctgtatactgtacccaaaaaagtacagta 573
           ||||||||||||||||||||||||||||||||||
Sbjct: 740 gttcgctgtatactgtacccaaaaaagtacagta 773


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 973
Length adjustment: 10
Effective length of query: 563
Effective length of database: 963
Effective search space:   542169
Effective search space used:   542169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)