Query= MSMg01no367_o03.b1 MSMg01no367_o03.b1 CHROMAT_FILE:
MSMg01no367_o03.b1 PHD_FILE: MSMg01no367_o03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:10 2005
(147 letters)
>mm_chr9_74634865_74635411
Length = 547
Score = 284 bits (147), Expect = 1e-81
Identities = 147/147 (100%)
Strand = Plus / Minus
Query: 1 cagtttttttcctttctagagaaaacctgtggtggtagggcccagtttctcagtactgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 cagtttttttcctttctagagaaaacctgtggtggtagggcccagtttctcagtactgag 288
Query: 61 tctgtgcagcagtcatgatttcaagtgttcttggtgtaggtaggtgtttggttcaatgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 tctgtgcagcagtcatgatttcaagtgttcttggtgtaggtaggtgtttggttcaatgtc 228
Query: 121 aatacttttgtaggaactgatgtctgg 147
|||||||||||||||||||||||||||
Sbjct: 227 aatacttttgtaggaactgatgtctgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 147
Length of database: 547
Length adjustment: 8
Effective length of query: 139
Effective length of database: 539
Effective search space: 74921
Effective search space used: 74921
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no367_o03.g1 MSMg01no367_o03.g1 CHROMAT_FILE:
MSMg01no367_o03.g1 PHD_FILE: MSMg01no367_o03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:10 2005
(461 letters)
>mm_chr9_74428594_74429455
Length = 862
Score = 847 bits (438), Expect = 0.0
Identities = 447/450 (99%), Gaps = 1/450 (0%)
Strand = Plus / Plus
Query: 1 aaataagcggacgaacaaagtaaagaaatcaattcagaacctaagccagaaagttaccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaataagcggacgaacaaagtaaagaaatcaattcagaacctaagccagaaagttaccac 260
Query: 61 agtgggcaaaatggtcactaacttggaagagattttcaaaaaacatgaagaaaaaacttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtgggcaaaatggtcactaacttggaagagattttcaaaaaacatgaagaaaaaacttc 320
Query: 121 agggaggaaattgaaactcaaaaagaaccaaacagaaattctggaaattaaagattcgat 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 321 agggaggaaattgaaactcaaaaagaacctaacagaaattctggaaattaaagattcgat 380
Query: 181 caataaaatgaaatgacatactgggaaacattatctgtagacatgacaaagcagaatggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caataaaatgaaatgacatactgggaaacattatctgtagacatgacaaagcagaatggg 440
Query: 241 tttcaggaatgaaagagaagtcaaaacaaattaaaacatattctcaacaatcaattaata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttcaggaatgaaagagaagtcaaaacaaattaaaacatattctcaacaatcaattaata 500
Query: 301 agcatgactgaaactaacaagggctttgacatatgttcaaaagaccaaacctaagaattg 360
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 501 agcatgactgaaactaacaagggctttgacatatgttgaaaagaccaaacctaagaattg 560
Query: 361 atagagtagggagaagagaggagacaaaggcaatttattcaatgtaattattgcagaagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atagagtagggagaagagaggagacaaaggcaatttattcaatgtaattattgcagaagt 620
Query: 421 ttttttt-caaatcgagagagagagagaga 449
||||||| ||||||||||||||||||||||
Sbjct: 621 ttttttttcaaatcgagagagagagagaga 650
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 461
Length of database: 862
Length adjustment: 10
Effective length of query: 451
Effective length of database: 852
Effective search space: 384252
Effective search space used: 384252
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
