Query= MSMg01no369_l15.b1 MSMg01no369_l15.b1 CHROMAT_FILE:
MSMg01no369_l15.b1 PHD_FILE: MSMg01no369_l15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:07:32 2005
(343 letters)
>mm_chr9_96846145_96846897
Length = 753
Score = 542 bits (280), Expect = e-158
Identities = 324/346 (93%), Gaps = 16/346 (4%)
Strand = Plus / Plus
Query: 14 gaattctgagcgcatagggacagaaactaggcagcttcctgaaagcttcgaggagagaat 73
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 gaattctgagcgcaaagggacagaaactaggcagcttcctgaaagcttcgaggagagaaa 273
Query: 74 cctgaatagggttttgaagtatgggtaggagtgttataggcacactgaggctgggcagtg 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 cctgaatagggttttgaagtatgggtaggagtgttataggcacactgaggctgggcagtg 333
Query: 134 ttacaagtaaagaaaacagacagggatcaggga-------gacagggaagctgagggcag 186
||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 334 ttacaagtagagaaaacagacagggatcagggatcagggagacagggaagctgagggcag 393
Query: 187 ggacagggctggtagctgaaacagaccagcggagaaagaaga---cagtggtcccattca 243
||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||
Sbjct: 394 ggacagggctggtagctgaaacagaccagtggagaaagaagatgacagtggtcctattca 453
Query: 244 cctgtgactgacatacggcctcgatgttttgcgctacagctaagcatccttt-tttt--t 300
||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 454 cctgtgactgacatatggcctcgatgttttgcgctacagctaagcatcctttcttttctt 513
Query: 301 ttctttt---ttcttttcttttcttttcttttcttttcttttcttt 343
||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 514 ttcttttcttttcttttcttttcttttcttttcttttcttttcttt 559
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 753
Length adjustment: 9
Effective length of query: 334
Effective length of database: 744
Effective search space: 248496
Effective search space used: 248496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no369_l15.g1 MSMg01no369_l15.g1 CHROMAT_FILE:
MSMg01no369_l15.g1 PHD_FILE: MSMg01no369_l15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:07:32 2005
(439 letters)
>mm_chr9_97013328_97014166
Length = 839
Score = 841 bits (435), Expect = 0.0
Identities = 438/439 (99%)
Strand = Plus / Minus
Query: 1 agtgaagcagtgttctatccggagagataaagaaggcgatgacagtgctgtgaacccagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 agtgaagcagtgttctatccggagagataaagaaggcgatgacagtgctgtgaacccagc 580
Query: 61 aggcttggcggtttgctcaagcctgagtccttatagacttcagcagcggtgccccagagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 aggcttggcggtttgctcaagcctgagtccttatagacttcagcagcggtgccccagagg 520
Query: 121 acggcgcccgaattagcacaatgtgctgggtctgcacccacagtggcctccaagagagac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 acggcgcccgaattagcacaatgtgctgggtctgcacccacagtggcctccaagagagac 460
Query: 181 agaaaggggaccagcaacactgtcttgtcaccgacccaggaataactgtgatggtacaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 agaaaggggaccagcaacactgtcttgtcaccgacccaggaataactgtgatggtacaag 400
Query: 241 aacatgcccatagaacttgttcacagccgcagcgttggggacagcctcagagtggaaaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 aacatgcccatagaacttgttcacagccgcagcgttggggacagcctcagagtggaaaca 340
Query: 301 agggctcgttctctgaataccgatcagtcaagtattcagtcaagcaacgaggttctgccg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 agggctcgttctctgaataccgatcagtcaagtattcagtcaagcaacgaggttctgccg 280
Query: 361 tgaaagggaacgaagcacccatcctgcagcaacactcgagtggatttcgaagacactttt 420
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 tgaaagggaacgaagcatccatcctgcagcaacactcgagtggatttcgaagacactttt 220
Query: 421 agtgaaaaattcctcacac 439
|||||||||||||||||||
Sbjct: 219 agtgaaaaattcctcacac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 839
Length adjustment: 9
Effective length of query: 430
Effective length of database: 830
Effective search space: 356900
Effective search space used: 356900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
