TGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTGGCTGGATGTGGCATACTTTTCCTCCCCC
ACTTCTCCCCGGGCCTCCCCCCGCTTATTTTGTTCCCAACACTATTGTAT
ATGCCAGCAAGATTTTGCTGACAGGATCCTCATATAGCTGTCTCTTGTGA
GGCCTGGCAAATACAGAAGTGGATGCTCATAGTCATATATTTGATGGAAC
ACAGGGCCCCCAATGGAAGAGCTAGAGAAAATACCCAAGGAGCAGAGGGG
GTCTGCAGAAGTATAGGAGAAACAACAATATGAAGTAACCAGTACCCCCA
GAGCTCGTGTCTCTAGCTGCATATGTAGCAGAAGATGGCCTAGTTGGCCA
TAATTGGGAGAAGAGGCCCTTGGTCTTGTGAAGATTATATGCCCTAGTAC
AGGGTAATGCCAGGGCCAGGAAGCAGAAGTGGGTGGGTTGGGGAGCAGGG
CGGGGGGAGGATATAGGGGACTTTCAGGACTGCTTTTTGAAATATATCTC
TATGATATACCTTCTCCTAATTATTTTTTACCTACATTTTATTATATATC
TTTAGATATAGTTTAAGAGAATACTGATTTTCCCAATTTTCAGAACACTT
ATACTACTTCCCCACAATATTTTTTTTTTAATTTCTTTCATACCCTTAAT
CTTTCTTTTTTCTCCCCGTCACATCTTTCTTTTTCTAAATATACTCTTTC
CTCTCTTACTTTTTTTTTTTTATCTAATCATTTTG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAGGATCCGCGGAATT
CTTCAAAGTTTCTTTTGTCTTATTATTTAGCATCTATCCTGACCCGTGTT
TTCTCAGAAGACTTATTTCTTCTTCTTTCTTTCATTTCTGAATATGCCAA
ATACTTTTAATTTTCGGTTCCTGACTTTCCTCTAAGTGTAGCTTAAGTAC
GTACCCATGTTCTTCCCTAGAACATTTTTAGTCTTTAATAAGTAATGGCA
GTAATACCGTTTCTAACAATCCATGGTTCTGGCACACTGGGCAAGAGCAC
CTCATCTCATGTCATCTGTGTCTCATGTCAATTTGCATGTGAGTTTCTAT
GAGGTTTCTCTACCAATTTCTGTAGACACACATCTTTTAAAAACACTTGA
ATGAGCCAGGCAGTGGTGTGCACGGCTTTAATCCTAGCACTTGGGAGTCA
GAGGCCGGCTGATTTCTGAGTTCAAGGCCAGCCTGGTCTACAGAGTGAAT
TCAAGGACAACCACAGCTATACAGAGAAACCCTGTCTTGAAAAACCACAC
ACACACACNAAACAAAACAAAACAAAAACAAAAACAAACCCACTTGAATG
AAAGACTCTTGCGTGCGCTTGACTGGNCAGGGAAGAACGACGCTGCAACA
GGATCCTTCTGCACACGTTTATTGGGAGAGCTTGATTGTATAGGCAAAAA
ATTCGAGGCCCGAACTGTTGCTGCTTTTATAGCCTAAGAAGGGCATGTCT
CACACCCAAAGGGTT

Query= MSMg01no371_g06.g1 MSMg01no371_g06.g1 CHROMAT_FILE:
MSMg01no371_g06.g1 PHD_FILE: MSMg01no371_g06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:09:48 2005
         (582 letters)



>mm_chr9_17254164_17255145
          Length = 982

 Score =  984 bits (509), Expect = 0.0
 Identities = 535/544 (98%), Gaps = 2/544 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   ggaattcttcaaagtttcttttgtcttattatttagcatctatcctgacccgtgttttct 64
           |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 205 ggaattcttcaaagtttcttctgtcttattatttagcatctatcctgacccgtgctttct 264

                                                                       
Query: 65  cagaagacttatttcttcttctttctttcatttctgaatatgccaaatacttttaatttt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cagaagacttatttcttcttctttctttcatttctgaatatgccaaatacttttaatttt 324

                                                                       
Query: 125 cggttcctgactttcctctaagtgtagcttaagtacgtacccatgttcttccctagaaca 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cggttcctgactttcctctaagtgtagcttaagtacgtacccatgttcttccctagaaca 384

                                                                       
Query: 185 tttttagtctttaataagtaatggcagtaataccgtttctaacaatccatggttctggca 244
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 385 tttttagtctttaataagtaatggcagtaattccgtttctaacaatccatggttctggca 444

                                                                       
Query: 245 cactgggcaagagcacctcatctcatgtcatctgtgtctcatgtcaatttgcatgtgagt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cactgggcaagagcacctcatctcatgtcatctgtgtctcatgtcaatttgcatgtgagt 504

                                                                       
Query: 305 ttctatgaggtttctctaccaatttctgtagacacacatcttttaaaaacacttgaatga 364
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttctatgaggttcctctaccaatttctgtagacacacatcttttaaaaacacttgaatga 564

                                                                       
Query: 365 gccaggcagtggtgtgcacggctttaatcctagcacttgggagtcagaggccggctgatt 424
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gccaggcagtggtgtgcacagctttaatcctagcacttgggagtcagaggccggctgatt 624

                                                                       
Query: 425 tctgagttcaaggccagcctggtctacagagtgaattcaaggacaaccacagctatacag 484
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 625 tctgagttcaaggccagcctggtctacagagtgaattcaaggacaaccacggctatacag 684

                                                                       
Query: 485 agaaaccctgtcttgaaaaaccacacacacacacnaaacaaaacaaaacaaaaacaaaaa 544
           |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| 
Sbjct: 685 agaaaccctgtcttgaaaaaccacacacacacacaaaacaaaacaaaacaaaa-caaaa- 742

               
Query: 545 caaa 548
           ||||
Sbjct: 743 caaa 746


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 982
Length adjustment: 10
Effective length of query: 572
Effective length of database: 972
Effective search space:   555984
Effective search space used:   555984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)