Query= MSMg01no372_b18.b1 MSMg01no372_b18.b1 CHROMAT_FILE:
MSMg01no372_b18.b1 PHD_FILE: MSMg01no372_b18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:47 2005
(300 letters)
>mm_chr9_118623209_118623908
Length = 700
Score = 555 bits (287), Expect = e-162
Identities = 296/299 (98%)
Strand = Plus / Plus
Query: 1 cctaaccagctctgtggccttggacagatagtgtggcctgatggtcatgcacacattgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctaaccagctctgtggccttggacagatagtgtggcctgatggtcatgcacacattgtg 260
Query: 61 gtcctccctttgccggatggccatgcatgcagtgtggtcctccctgatggtcatagtgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtcctccctttgccggatggccatgcatgcagtgtggtcctccctgatggtcatagtgct 320
Query: 121 ctccctgaaaataatttggtgagaagacaatattaacacggccattttggggttcagagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctccctgaaaataatttggtgagaagacaatattaacacggccattttggggttcagagc 380
Query: 181 tgatggaaatgcttcccggataataccactcactggttataaatgtgttattggaaaagc 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 381 tgatggaaatgcttcccggataataccactcactggttataaatgtgttattgggaaagc 440
Query: 241 acagtgagcagctgtccgcctctcggggccggtgggggtgaagtgtggtggtgtgtaag 299
|||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 441 acagtgagcagctgtctgcctctcggagccggtgggggtgaagtgtggtggtgtgtaag 499
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 300
Length of database: 700
Length adjustment: 9
Effective length of query: 291
Effective length of database: 691
Effective search space: 201081
Effective search space used: 201081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no372_b18.g1 MSMg01no372_b18.g1 CHROMAT_FILE:
MSMg01no372_b18.g1 PHD_FILE: MSMg01no372_b18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:47 2005
(238 letters)
>mm_chr9_118786646_118787278
Length = 633
Score = 263 bits (136), Expect = 6e-75
Identities = 196/238 (82%), Gaps = 37/238 (15%)
Strand = Plus / Minus
Query: 1 acttcctaagtttgttaaagcaacacagaatcaatgagagagagagagagagagagagag 60
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 acttcctaagtttgttaaagcaacacagaatcaatgagagagagagaga----------- 452
Query: 61 agagagagagagagagagagagagagagagagagagagcgcaagcaagcctccccagaga 120
| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 451 ------------------a-agagagagagagagaga--gcaagcaagcctccccagaga 413
Query: 121 ggaggtaaaaatccatggggggggggggaccaggaaagggcagcaggttgcagtacagtc 180
|||||||||||||| | ||| |||||||||||||||||||||||| ||| ||||||
Sbjct: 412 ggaggtaaaaatcc-----gtgggagggaccaggaaagggcagcaggtttcagcacagtc 358
Query: 181 cctccgcagagcagctcattggctgacttccctgtctactctccagggactgaacaca 238
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 357 cctccgcagagcagctcattggctgacttccctgtctacactccagggactgaacaca 300
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 633
Length adjustment: 9
Effective length of query: 229
Effective length of database: 624
Effective search space: 142896
Effective search space used: 142896
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
