Query= MSMg01no372_c21.b1 MSMg01no372_c21.b1 CHROMAT_FILE:
MSMg01no372_c21.b1 PHD_FILE: MSMg01no372_c21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:52 2005
(444 letters)
>mm_chr9_50459761_50460604
Length = 844
Score = 582 bits (301), Expect = e-170
Identities = 319/325 (98%), Gaps = 2/325 (0%)
Strand = Plus / Minus
Query: 121 gtttcactcaccctagatggtctggaagtcacaagagatctgaatgctaagattaaagtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 gtttcactcaccctagatggtctggaagtcacaagagatctgaatgctaagattaaagtc 785
Query: 181 atgcatcatcatgccacgctgctatttccttacagagaactccttgctatataatctcgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 atgcatcatcatgccacgctgctatttccttacagagaactccttgctatataatctcgt 725
Query: 241 ttgctcttgaacttatgttgcccaggctaactttgagctaccatcctcctgcttcaggct 300
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 ttgctcttgaactcatgttgcccaggctaactttgagctaccatcctcctgcttcaggct 665
Query: 301 cctgagggtgtggttacaagaaaacacccagctttggcctttacttttgtaagtcttcag 360
||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 664 cctgagggtgtggttacaagaaaacactcagctttggcctttacttt-gtaagtcttcag 606
Query: 361 tgttgagagaaacagtagcggagtaacttcttacctgctgatgcagagacccc-attgat 419
|||||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||
Sbjct: 605 tgttgagagaaacagtagcggagtaacttcttgcctgctgatgcagagacccccagtgat 546
Query: 420 actgtatttcataacactggaaaat 444
|||||||||||||||||||||||||
Sbjct: 545 actgtatttcataacactggaaaat 521
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 444
Length of database: 844
Length adjustment: 10
Effective length of query: 434
Effective length of database: 834
Effective search space: 361956
Effective search space used: 361956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no372_c21.g1 MSMg01no372_c21.g1 CHROMAT_FILE:
MSMg01no372_c21.g1 PHD_FILE: MSMg01no372_c21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:52 2005
(371 letters)
>mm_chr9_50269510_50270280
Length = 771
Score = 694 bits (359), Expect = 0.0
Identities = 368/371 (99%)
Strand = Plus / Plus
Query: 1 aacacagtatataaaatgcagtggtttggagctctaatgtccttcagacccaggctcctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacacagtatataaaatgcagtggtttggagctctaatgtccttcagacccaggctcctg 260
Query: 61 gttatcctcacagtatcttgaagatttcttcccctgtgtaatgggagcaaattcttagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttatcctcacagtatcttgaagatttcttcccctgtgtaatgggagcaaattcttagag 320
Query: 121 tgggtttgtgaggacctggcaagtcaggcctcccagcaagggtctgaggctgagacaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgggtttgtgaggacctggcaagtcaggcctcccagcaagggtctgaggctgagacaagg 380
Query: 181 aggggctgggaggggttgcttctcttccatctctttgagaaccacaagccagcagcatcc 240
|||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 381 aggggctgggaggggttgcttctcttccatctctttgagagccacaaggcagcagcatcc 440
Query: 241 tttctggaaccaagtaggctccttcaaggcaaggtgatgtttcacaaggttcacatgata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttctggaaccaagtaggctccttcaaggcaaggtgatgtttcacaaggttcacatgata 500
Query: 301 accacagttcacagaagcaggccacaggagtgaacactgtgtgggggattaggggagatt 360
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 501 accacagttcacagaagcaggccacaggagtgaacactgtatgggggattaggggagatt 560
Query: 361 aaggagaaatc 371
|||||||||||
Sbjct: 561 aaggagaaatc 571
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 771
Length adjustment: 9
Effective length of query: 362
Effective length of database: 762
Effective search space: 275844
Effective search space used: 275844
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
