Query= MSMg01no372_f09.b1 MSMg01no372_f09.b1 CHROMAT_FILE:
MSMg01no372_f09.b1 PHD_FILE: MSMg01no372_f09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:03 2005
(432 letters)
>mm_chr9_121458576_121459407
Length = 832
Score = 820 bits (424), Expect = 0.0
Identities = 430/432 (99%)
Strand = Plus / Plus
Query: 1 aggatatggaagcagcttttgtgctgattggggccaaaggacaaatccagtagacatctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggatatggaagcagcttttgtgctgattggggccaaaggacaaatccagtagacatctt 260
Query: 61 ccatgaggctttctggagaggccatggtgcagcccagaatcccaagaaacacagttcact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccatgaggctttctggagaggccatggtgcagcccagaatcccaagaaacacagttcact 320
Query: 121 gaaactagaatcccacttgagggcagttagtttagggcccactcagtcccagcagcatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaaactagaatcccacttgagggcagttagtttagggcccactcagtcccagcagcatgg 380
Query: 181 tagcagaaccctttttaaaaataaagccacagattaaatcagaacatgttatagttgata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagcagaaccctttttaaaaataaagccacagattaaatcagaacatgttatagttgata 440
Query: 241 cacagcttgaaggcctctgactccctgcttctctacctgttaagactcccaaagtttcaa 300
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cacagcaagaaggcctctgactccctgcttctctacctgttaagactcccaaagtttcaa 500
Query: 301 agaacatgaatccagtggggcaacctaaagccaggccctgaaggctgagtactgagcagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agaacatgaatccagtggggcaacctaaagccaggccctgaaggctgagtactgagcagg 560
Query: 361 ggattgtaggttgtctcaaagggtcaaagagcagttacacagatggtcagagtttgagag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggattgtaggttgtctcaaagggtcaaagagcagttacacagatggtcagagtttgagag 620
Query: 421 gatttgaacaca 432
||||||||||||
Sbjct: 621 gatttgaacaca 632
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 832
Length adjustment: 9
Effective length of query: 423
Effective length of database: 823
Effective search space: 348129
Effective search space used: 348129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no372_f09.g1 MSMg01no372_f09.g1 CHROMAT_FILE:
MSMg01no372_f09.g1 PHD_FILE: MSMg01no372_f09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:03 2005
(239 letters)
>mm_chr9_121635099_121635735
Length = 637
Score = 435 bits (225), Expect = e-126
Identities = 235/239 (98%), Gaps = 2/239 (0%)
Strand = Plus / Minus
Query: 1 ataacctttggaagagcagtaagggactcttaaccgctgaaccgtctctccagcccccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ataacctttggaagagcagtaagggactcttaaccgctgaaccgtctctccagcccccaa 435
Query: 61 gtattcttaatagtgtgtggcctgttaggcccagtcagggacgaatgagcacaaccctct 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 434 gtattcttaatagtgtgtggcctgttaggccctgtcagggacgaatgagcacaaccctct 375
Query: 121 tgagagtcttttctgatcagtagttagaaggaaagctttcccatactctttggtgctttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tgagagtcttttctgatcagtagttagaaggaaagctttcccatactctttggtgctttc 315
Query: 181 tttcctgagataatggttgaagccaatcacctaaactcaatgctcatgttctactccct 239
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 tttcctgagataa--cttgaagccaatcacctaaactcaatgctcatgttctactccct 258
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 637
Length adjustment: 9
Effective length of query: 230
Effective length of database: 628
Effective search space: 144440
Effective search space used: 144440
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
