Query= MSMg01no372_p12.b1 MSMg01no372_p12.b1 CHROMAT_FILE:
MSMg01no372_p12.b1 PHD_FILE: MSMg01no372_p12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:50 2005
(587 letters)
>mm_chr9_6033554_6034540
Length = 987
Score = 1089 bits (563), Expect = 0.0
Identities = 578/583 (99%)
Strand = Plus / Plus
Query: 5 gaattcatgctttcactgcccaggagatagagtagctatagaaacagacattcttgctct 64
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatgctttcactgcccaagagatagagtagctatagaaacagacattcttgctct 264
Query: 65 cactgctctgggccaaaatcttcaaggcattggcagctcaagtgccttcagaggcttctt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cactgctctgggccaaaatcttcaaggcattggcagctcaagtgccttcagaggcttctt 324
Query: 125 acactggattgcagaaatatccccatgattctatcttcatatgttgtgttctatgctatg 184
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agactggattgcagaaatatccccatgattctatcttcatatgttgtgttctatgctatg 384
Query: 185 cacatacatcttgggtgtctgtggattttaatgtactcacatttcataaaaatgaatgca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cacatacatcttgggtgtctgtggattttaatgtactcacatttcataaaaatgaatgca 444
Query: 245 cattataagtgttttcttgaagtcctgcgggctagggagagttcagcacttaagagcact 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cattataagtgttttcttgaagtcctgcgggctagggagagttcagcacttaagagcact 504
Query: 305 tgctgctcttgtagaggacctgggtacagttttcagaatccacgtgactgctcacactgt 364
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 505 tgctgctcttgtagaggacctgggtacagttttcagaatccacatgactgctcacactgt 564
Query: 365 ctgaaactccaggtccaggggatccaacaccttcctctgatttcagtgggcaccaagaac 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ctgaaactccaggtccaggggatccaacaccttcctctgatttcagtgggcaccaagaac 624
Query: 425 tcatataacacatatccatgcacttggcaaatgctatacacatttaaaaaattaaaatgt 484
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 625 tcatataacacatatccatgcacttggcaaatgctatacacattttaaaaattaaaatgt 684
Query: 485 ttataatttcttaatacaaagccaaatttctatacaaaaatcctatttcagcagcctgac 544
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ttataatttcttgatacaaagccaaatttctatacaaaaatcctatttcagcagcctgac 744
Query: 545 atagtgaccctttctcctgactgctattttaattatatgtaac 587
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 atagtgaccctttctcctgactgctattttaattatatgtaac 787
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 987
Length adjustment: 10
Effective length of query: 577
Effective length of database: 977
Effective search space: 563729
Effective search space used: 563729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no372_p12.g1 MSMg01no372_p12.g1 CHROMAT_FILE:
MSMg01no372_p12.g1 PHD_FILE: MSMg01no372_p12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:50 2005
(504 letters)
>mm_chr9_6164531_6165434
Length = 904
Score = 613 bits (317), Expect = e-180
Identities = 323/325 (99%)
Strand = Plus / Minus
Query: 1 tgaacattttgggttttttattataatatgttctcacaaactgatttcagcgtgtgatac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgaacattttgggttttttattataatatgttctcacaaactgatttcagcgtgtgatac 266
Query: 61 atgtgcaggctcacttaagcccacatatattttaatcatttctgttccaaactctgactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atgtgcaggctcacttaagcccacatatattttaatcatttctgttccaaactctgactg 206
Query: 121 tatcctgtcctagattcattcctgtcactgtgacaaaatattcagagcatcaacaactta 180
|||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 205 tatcctgtcctagattcattcctgccactgtgacaaaatattcagaacatcaacaactta 146
Query: 181 aaggagaaagggtttaattacatcacaattctactccagggaagccaagacaggagctca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 aaggagaaagggtttaattacatcacaattctactccagggaagccaagacaggagctca 86
Query: 241 agtatctagtcacatcatgtgcatcaatactgcctgcctgctttcttccctgattattta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 agtatctagtcacatcatgtgcatcaatactgcctgcctgctttcttccctgattattta 26
Query: 301 gttctaactaagctagctttactta 325
|||||||||||||||||||||||||
Sbjct: 25 gttctaactaagctagctttactta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 904
Length adjustment: 10
Effective length of query: 494
Effective length of database: 894
Effective search space: 441636
Effective search space used: 441636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
