Query= MSMg01no373_g11.b1 MSMg01no373_g11.b1 CHROMAT_FILE:
MSMg01no373_g11.b1 PHD_FILE: MSMg01no373_g11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:21 2005
(552 letters)
>mm_chr9_89703643_89704596
Length = 954
Score = 820 bits (424), Expect = 0.0
Identities = 431/434 (99%), Gaps = 2/434 (0%)
Strand = Plus / Minus
Query: 121 gataggtaaagatcctttcccaatctgttggtggtctttttgtcttgttgacggtgtctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 954 gataggtaaagatcctttcccaatctgttggtggtctttttgtcttgttgacggtgtctt 895
Query: 181 ttgccttgcagaagcacaaaaggcgtttcttagtccagacaatcattagaacaaaatacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 894 ttgccttgcagaagcacaaaaggcgtttcttagtccagacaatcattagaacaaaatacc 835
Query: 241 acaaatcatgtagtttacatgtaacagtaatttatttttcacagttctaggagctgagag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 834 acaaatcatgtagtttacatgtaacagtaatttatttttcacagttctaggagctgagag 775
Query: 301 cttcaagatcagggtattggactccttcctcatagatggtacttgctgctgtgtctttac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 cttcaagatcagggtattggactccttcctcatagatggtacttgctgctgtgtctttac 715
Query: 361 caggtagaaggaacaagatatgtctctagagcctcttatataagaacaacaatttaatca 420
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 714 caggtagaaggaacaagatatgtctctggagcctcttatataagaacaacaatttaatca 655
Query: 421 tgacctaaccctacctctacttcacctccatcttttctccacaccagtatcttgaaagtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 tgacctaaccctacctctacttcacctccatcttttctccacaccagtatcttgaaagtt 595
Query: 481 gggatttcgatatgtaattatgcagtggtcctatatatttaatataggaggga--ttttt 538
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 594 gggatttcgatatgtaattatgcagtggtcctatatatttaatataggagggattttttt 535
Query: 539 ttccttaagctaga 552
||||||||||||||
Sbjct: 534 ttccttaagctaga 521
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 552
Length of database: 954
Length adjustment: 10
Effective length of query: 542
Effective length of database: 944
Effective search space: 511648
Effective search space used: 511648
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no373_g11.g1 MSMg01no373_g11.g1 CHROMAT_FILE:
MSMg01no373_g11.g1 PHD_FILE: MSMg01no373_g11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:21 2005
(197 letters)
>mm_chr9_89549878_89550474
Length = 597
Score = 373 bits (193), Expect = e-108
Identities = 196/197 (99%)
Strand = Plus / Plus
Query: 1 atgaaattcttaggcaaatggatggatctagaaaatatcatcctgagtgaggtaacccaa 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 atgaaattcttaggcaaatggatggatctagaaaatatcatcctgggtgaggtaacccaa 260
Query: 61 tcagaaaagaacacacatagtatgcactcattattttatttttaattgattaaagattga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcagaaaagaacacacatagtatgcactcattattttatttttaattgattaaagattga 320
Query: 121 tcaaaataacattttcataattaagatttatgaatatgcatatgctgtgtgtgcttaggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcaaaataacattttcataattaagatttatgaatatgcatatgctgtgtgtgcttaggg 380
Query: 181 ttacatgaaataaatga 197
|||||||||||||||||
Sbjct: 381 ttacatgaaataaatga 397
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 197
Length of database: 597
Length adjustment: 8
Effective length of query: 189
Effective length of database: 589
Effective search space: 111321
Effective search space used: 111321
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
