Query= MSMg01no373_m08.b1 MSMg01no373_m08.b1 CHROMAT_FILE:
MSMg01no373_m08.b1 PHD_FILE: MSMg01no373_m08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:48 2005
(422 letters)
>mm_chr9_66906841_66907663
Length = 823
Score = 607 bits (314), Expect = e-178
Identities = 389/420 (92%), Gaps = 16/420 (3%)
Strand = Plus / Plus
Query: 8 gaattcagatctattccgtcattctcaacagggttgccttgccacttttgcaaatctatt 67
|||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 208 gaattcagatctatcccgtcgttctcaacaaggttgccttgccacttttgcaaatctatt 267
Query: 68 cgg-attttatttttattccaagaggccaagaaccttgaaattcccaaatcttgatcccg 126
||| |||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||
Sbjct: 268 cgggattttatttttattccaagaggccaaaaacctagaaattcctaaatcttgatcccg 327
Query: 127 accaagtatcaagttcaaattcagatgtctggcgtcctctttctgggactctttgtcaga 186
|||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 328 accaagcatcaagttcaaattcagatgtctggcgtcctgtttctgggactttttgtcaga 387
Query: 187 cccactgccagaagctcatttttctggagaagttgggaacgttttggtggataacaaagt 246
||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 388 cccactgccagaagctcatttttctggagaagttgggaacgttttggtgga-------gt 440
Query: 247 gagcagaggacttgtttttgtaatgattcttttttgttaagatattttccgcaagactta 306
||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 441 gagaagaggacttgtttttgtaatgattcttttttggtaagatattttccgcaagactta 500
Query: 307 ccattgggcctttctgttctccttaagacagcctgtgtttttttgtatggttgttttttg 366
||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 501 ccaatgggcctttctgttttccttaagacggcctgtgtttttttgtatggttgttttttg 560
Query: 367 tttgtttgtttgtgtttgctgttgt---cattttgggttttgttgttgttgtt-ttgttt 422
||||||||| || ||||||||||| ||||||| |||||||||||||||| ||||||
Sbjct: 561 tttgtttgt--gt-tttgctgttgttttcattttga-ttttgttgttgttgttgttgttt 616
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 823
Length adjustment: 9
Effective length of query: 413
Effective length of database: 814
Effective search space: 336182
Effective search space used: 336182
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no373_m08.g1 MSMg01no373_m08.g1 CHROMAT_FILE:
MSMg01no373_m08.g1 PHD_FILE: MSMg01no373_m08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:48 2005
(244 letters)
>mm_chr9_67058724_67059366
Length = 643
Score = 449 bits (232), Expect = e-131
Identities = 241/244 (98%), Gaps = 1/244 (0%)
Strand = Plus / Minus
Query: 1 caagctaccaccaccaccacctctcacattccaatgtggtagcttaccaggccaaagtca 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 caagctaccaccaccactacctctcacattccaatgtggtagcttaccaggccaaagtca 384
Query: 61 tgcagctttccaagtctgaatcatttagaaaactgtaacttctcttcttctttaaaaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 383 tgcagctttccaagtctgaatcatttagaaaactgtaacttctcttcttcttt-aaaaaa 325
Query: 121 aaaaaaatccttttctaacaatgttttccttcatagctagggtttccccaatacttgggg 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 324 aaaaaaatccttttctaacaatgttttccttcatagcttgggtttccccaatacttgggg 265
Query: 181 ctttcttactctttcttccaagctcccttcccactgtgggttgtttgtttcctgtcttag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctttcttactctttcttccaagctcccttcccactgtgggttgtttgtttcctgtcttag 205
Query: 241 taag 244
||||
Sbjct: 204 taag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 643
Length adjustment: 9
Effective length of query: 235
Effective length of database: 634
Effective search space: 148990
Effective search space used: 148990
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
