XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAAGTA
ATTTCTTTCTTCTTCATAGCTACAAAGAAGGAACAGGGGGAACAACAACA
ACAAGAAAATAAAGAGCCTGCCTTCTTAAAAAAAAAAAAAACATTTAACT
TATTCCGAGGGATGTAATTTGTGGAAAGAAGTACAAGGTTGAAAAGACAT
GGCCACTCTAGCAGACTTTGCCCTACCCCTCTTTTCTTTGGTCTGTTTAA
ATATTAAGGTGGAAGATGAAGAGGAGATACTATAGTCATAAATGTAAAGA
AAAAACACATTTTATTTCAAGTACCTCGTTAATAATTCAATTTATAGTAA
TATAAGTAATGTTGGCTTTGACTTAAAGAATTGGGATTAGGGCCAGAGTC
CAGTAGTAAAGATTGGACTACAAAGATATCTAGAGAAACAGGCAGGGTGA
GGTAGGATAGCATATTTGTAAGACTATAGAAAACAGAACATGACGGTGTC
ATAGTACGTTTGGAAGGCAGAAACAGCCAGATCTTTGTGTGTTTAAGGCC
AGCCTGGCATGCATAATGAATTCTAGGGTGTCTGCAGCCACACAGAACCT
ACTTCANAATAAATAAATAAAAATAGTTTAAAAAGGCATCCATAAGCCGG
GCGGTGGTGGCGCACGCCTTTAATCCAGCACTCCGGAGGCAGAGGCAGAG
GCAGGCAGATTTCTGAGTTCAAGGTCN

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCTTGTTTAGATCTGTGCCTCTTT
TTTGATTGGGTCATTTAATTTGTTGTTGTCGTCTAACTTCTTGAGTTTTC
TATATATTTTGGATATTAGCCTTCTGTCATATGTAGTATTGGTAAAGATC
TTTTTCTAATATGTAGGCTGTTGTTTTGTCCTAATTACAGTGTCTTTTGG
CTTACAAAAGCTTTTTAGTTTCATGAGGACCCATTCATTCATTGCTGATG
TTAGTGCCTGACTGATTGGTGTTCTGTTCAGGAAATTGTCTCCTGTACTC
TTGCACTTTCTCTTCTGTTAGATTTAGTGTGTCTTGTTTTATGTGGAGGT
CTTTGATCTGCTTGGACCTGAGTTTTGTTCAGGGTGATAACTGTGGAGAT
CAGAGGATCACCCAACTCTCCTCAGTGGGTTGTGCACTAGGTGCACCTGA
CTGGGAAGGGATTGGTGGGGCAGGGTTTAGGGCTGGCTAGTCTTGGTGCC
CTGCAGGCCTCTGTGTGGAAGCAGGATGCTCTTGGTGTCCTGCTAGGCTC
CTCCAGATGAAAAGGTGAGCTCACTTCTAGATAATGACGCCAGGGGGACT
ATGGCTTATTTACCGCTTATGGCGCTTTTTGCTTTCGTTTTTTTACCCTT
TGGCTTTTGTACTTCCTTTGGTTGAGGGGTGGCCGG

Query= MSMg01no373_o10.b1 MSMg01no373_o10.b1 CHROMAT_FILE:
MSMg01no373_o10.b1 PHD_FILE: MSMg01no373_o10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:58 2005
         (549 letters)



>mm_chr9_100818115_100819068
          Length = 954

 Score = 1011 bits (523), Expect = 0.0
 Identities = 546/559 (97%), Gaps = 10/559 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcttcttcatagctacaaagaaggaacagggggaacaacaacaacaagaaaataaagagc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 tcttcttcatagctacaaagaaggaacagggggaacaacaacaacaagaaaataaagagc 592

                                                                       
Query: 61  ctgccttcttaaaaaaaaaa-----aaaacatttaacttattccgagggatgtaatttgt 115
           ||||||||||||||||||||     |||||||||||||||||||||||||||||||||||
Sbjct: 591 ctgccttcttaaaaaaaaaaaaaacaaaacatttaacttattccgagggatgtaatttgt 532

                                                                       
Query: 116 ggaaagaagtacaaggttgaaaagacatggccactctagcagactttgccctacccctct 175
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 ggaaagaagtacaaggttgaaaagacatggccactctagcagactttgccctacccctct 472

                                                                       
Query: 176 tttctttggtctgtttaaatattaaggtggaagatgaagaggagatactatagtcataaa 235
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 tttctttggtctgtttaaatattaaggtggaagatgaagaggagatactatagtcataaa 412

                                                                       
Query: 236 tgtaaagaaaaaacacattttatttcaagtacctcgttaataattcaatttatagtaata 295
           ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||
Sbjct: 411 tgtaaagaaaaaacacattttaaatcaagtacctcgttaataattcaatttatagtaata 352

                                                                       
Query: 296 taagtaatgttggctttgacttaaagaattgggattagggccagagtccagtagtaaaga 355
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 taagtaatgttggctttgacttaaagaattgggattagggccagagtccagtagtaaaga 292

                                                                       
Query: 356 ttggactacaaagatatctagagaaacaggcagggtgaggtaggatagcatatttgtaag 415
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 ttggactacaaagttatctagagaaacaggcagggtgaggtaggatagcatatttgtaag 232

                                                                       
Query: 416 actatagaaaacagaacatgacggtg-----tcatagtacgtttggaaggcagaaacagc 470
           ||||||||||||||||||||||||||     |||||||||||||||||||||||||||||
Sbjct: 231 actatagaaaacagaacatgacggtgtcatatcatagtacgtttggaaggcagaaacagc 172

                                                                       
Query: 471 cagatctttgtgtgtttaaggccagcctggcatgcataatgaattctagggtgtctgcag 530
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 cagatctttgtgtgtttaaggccagcctggcatgcataatgaattctagggtgtctgcag 112

                              
Query: 531 ccacacagaacctacttca 549
           |||||||||||||||||||
Sbjct: 111 ccacacagaacctacttca 93


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 954
Length adjustment: 10
Effective length of query: 539
Effective length of database: 944
Effective search space:   508816
Effective search space used:   508816
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)