Query= MSMg01no374_c02.b1 MSMg01no374_c02.b1 CHROMAT_FILE:
MSMg01no374_c02.b1 PHD_FILE: MSMg01no374_c02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:15 2005
(401 letters)
>mm_chr9_28295311_28296111
Length = 801
Score = 540 bits (279), Expect = e-158
Identities = 326/345 (94%), Gaps = 9/345 (2%)
Strand = Plus / Minus
Query: 5 gaattcatcccctgatta----tgttgcacagcctgagaatcatcctggctctgggcaat 60
||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||
Sbjct: 344 gaattcatcccctgaatatgtttgttgcacagcctgagaatcaccctggctctgggcaat 285
Query: 61 gacaaaagcacaagatgaggtaagattcactttctggattggacttccctgaaggaccac 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 284 gacaaaagcacaagatgaggtaagattcactttctggattggacttccctgatggaccac 225
Query: 121 tgtggtctgtaatgccactggaggtcatgttggtgtatgtggtctctgct-cttttcctg 179
|||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||| |
Sbjct: 224 tgtggtctgtaatgccactggaggtcatgttggtgtgtgtggtctctgctac-tttcccg 166
Query: 180 cgtcatgatgaaggttaagatccatgtggatgtacacaatctgt---gctgctgactgat 236
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 165 ggtcatgatgaaggttaagatccatgtggatgtacacaatctgtactgctgctgactgat 106
Query: 237 gctttggtgacattattgggctttgctgccataggggtcatgttgatgtgagtggcatct 296
|||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 105 gctttgctgacattcttgggctttgctgccataagggtcatgttgatgtgagtggcatct 46
Query: 297 ctggctatgttaagacccatggtccatgtagccactggtggccat 341
|||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 45 ctggctatgttaagacccatggtccatgtaaccactggtggccat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 401
Length of database: 801
Length adjustment: 9
Effective length of query: 392
Effective length of database: 792
Effective search space: 310464
Effective search space used: 310464
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no374_c02.g1 MSMg01no374_c02.g1 CHROMAT_FILE:
MSMg01no374_c02.g1 PHD_FILE: MSMg01no374_c02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:15 2005
(459 letters)
>mm_chr9_28081366_28082224
Length = 859
Score = 872 bits (451), Expect = 0.0
Identities = 457/459 (99%)
Strand = Plus / Plus
Query: 1 gttgtgaaaggatcagagaacagaacagttgctggaggtgagccaagagagggttctggg 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 201 gttgtgaaaggatcagagaacagagcagttgctggaggtgagccaagagagggttctggg 260
Query: 61 tatttatgatggcaattacaataatcaccattgtcatccaaatcaaaataaatgcacctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatttatgatggcaattacaataatcaccattgtcatccaaatcaaaataaatgcacctt 320
Query: 121 gaagactgcttgctctgtgcctggcgtggtaccaagtactccgtacacttcatcttagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaagactgcttgctctgtgcctggcgtggtaccaagtactccgtacacttcatcttagtg 380
Query: 181 agtcttcccaataagcctgtaaggtgcagtgttggtgatatagtggtgagcatagatgcc 240
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtcttctcaataagcctgtaaggtgcagtgttggtgatatagtggtgagcatagatgcc 440
Query: 241 ttcaaaatgctctgtacagtcctgctatcatcacagaattagcagcgagatatgagagga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttcaaaatgctctgtacagtcctgctatcatcacagaattagcagcgagatatgagagga 500
Query: 301 ccctgtgttctgaggctgaagtcaaggaaatgagacccccatcttgacatatctgaatgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccctgtgttctgaggctgaagtcaaggaaatgagacccccatcttgacatatctgaatgc 560
Query: 361 agatcaatgtttctcgaacccagctgatgggtggactttaaagggatagctgaagatgca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agatcaatgtttctcgaacccagctgatgggtggactttaaagggatagctgaagatgca 620
Query: 421 tggaattcttttacttttaaattgcactttatctgtatg 459
|||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tggaattcttttacttttaaattgcactttatctgtatg 659
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 859
Length adjustment: 10
Effective length of query: 449
Effective length of database: 849
Effective search space: 381201
Effective search space used: 381201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
