Query= MSMg01no375_l14.b1 MSMg01no375_l14.b1 CHROMAT_FILE:
MSMg01no375_l14.b1 PHD_FILE: MSMg01no375_l14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:24 2005
(495 letters)
>mm_chr9_53309207_53310102
Length = 896
Score = 907 bits (469), Expect = 0.0
Identities = 487/493 (98%), Gaps = 1/493 (0%)
Strand = Plus / Plus
Query: 4 ggaattcaataaatgagcactactgtcaccaatgcagttaaaacataaagaatatgagac 63
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 204 ggaattcaataaatgagcactactgtcaccaatgcagttaaaagataaagaatatgagac 263
Query: 64 tatactatagctctacagttccagaataatgcttgctatggtaagttcaaaggtgaaaaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tatactatagctctacagttccagaataatgcttgctatggtaagttcaaaggtgaaaaa 323
Query: 124 tgactgaattctggggagcaaagcttt-aatccttaaaagtaaactatcctaacctacct 182
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 324 tgactgaattctggggagcaaagcttttaatccttaaaagtaaactatcctaacctacct 383
Query: 183 actcgtcatggcaagtttgtaattatgcgttactatgcacaaagagctgcgttctatgtg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 actcgtcatggcaagtttgtaattatgcgttactatgcacaaagagctgcgttctatgtg 443
Query: 243 aacatttataatggtagttataactaagcaatcaatttctcagaggtttaagaaattttc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aacatttataatggtagttataactaagcaatcaatttctcagaggtttaagaaattttc 503
Query: 303 tagtaacaccaaaaaaatcctaagagatatttttcatatctctctcatatcgtataaaga 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tagtaacaccaaaaaaatcctaagagatatttttcatatctctctcatatcgtataaaga 563
Query: 363 atgttaaaatcgggctagagagatggctcagtggttaaaagcactaactgttcttctgaa 422
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 564 atgttaaaatcgggctagagagatggctcagtggttaagagcactaactgttcttctgaa 623
Query: 423 ggtcctgagtttaaatcccagcaaccacatggtggctcacaaccacctgtaatgagatct 482
||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 624 ggtcctgagttcaaatcccagcaaccacatggtggctcacaaccatctgtaatgagatct 683
Query: 483 gacgccctcttct 495
|| ||||||||||
Sbjct: 684 gatgccctcttct 696
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 896
Length adjustment: 10
Effective length of query: 485
Effective length of database: 886
Effective search space: 429710
Effective search space used: 429710
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no375_l14.g1 MSMg01no375_l14.g1 CHROMAT_FILE:
MSMg01no375_l14.g1 PHD_FILE: MSMg01no375_l14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:24 2005
(418 letters)
>mm_chr9_53492013_53492829
Length = 817
Score = 745 bits (385), Expect = 0.0
Identities = 409/417 (98%), Gaps = 1/417 (0%)
Strand = Plus / Minus
Query: 1 tatggagctattctgagaatcaagcaaatggtgttaaaactatttgggtgcagaaagcat 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 tatggagctattctgaaaatcaagcaaatggtgttaaaactatttgggtgcagaaagcat 557
Query: 61 aatacaagtgttttgctggttctggacatgtccttatatttacaatgaagacagattttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 aatacaagtgttttgctggttctggacatgtccttatatttacaatgaagacagattttc 497
Query: 121 ttgagttctttcttgttatttctgtgtggagataccagacgacagtgtgtgttttcacgg 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 496 ttgagttctttcttgttatttctgtgtggagataccagaagacagtgtgtgttttcacgg 437
Query: 181 accaggggagctcttggctggtgtttgtcctctgtccttctgccttgaacttctgctgaa 240
||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 436 accaggggagctcttggctggtgtttgtcctctgtccttctaccttgaactgctgctgaa 377
Query: 241 tcacttcttctctaaagcataaacaatagagaagaaaacccttgggaaactaattcaacc 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tcactgcttctctaaagcataaacaatagagaagaaaacccttgggaaactaattcaacc 317
Query: 301 aaaaagttgtatctggaaatattttgtgcaacattgaagtaggcatttaattgtatttta 360
|||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 316 aaaaagttgtatctggaaatattttgtgcaacgttgaagtaggtatttaattgtatttta 257
Query: 361 aaaatataaacacttgtacattttctagatttgtgtatttttaatagtacccatgaa 417
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 aaa-tataaacacttgtacattttctagatttgtgtatttttaatagtacccatgaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 817
Length adjustment: 9
Effective length of query: 409
Effective length of database: 808
Effective search space: 330472
Effective search space used: 330472
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
