TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTCAAAGATAGTATTTGGAAGTCTTTGTTTCAGGCACTCTCTTCAATAG
ACCTCGTTTCTGACTTAAGTCTCACAAACTCTTTAGCGACATCGTCGCTG
GTCCTCTGAGAGAGTATTCTGAGGATGGTTAAACCAGTTTCATCCATAGA
GAGATTTTTCAGAAGAGGGTACCACGCCCCGTAGCTCCCTTTCTCTGCTA
TGTTCTGTAACTGAATGACTGTCATTCCAATTATTCGATCTTCTCGGGCA
AAGCAGTAGTCCTTAACCGAGAGGTGAAGTTCATAGGCTCCTGGGCGGTT
CTCGTTACCCAGAATGCTGTATGAATTCAAGACATAAAATGAGTCAAACT
TGCACTCACAGTGCTGAAATACTGTTAAACTTTGCTCACAGCTTGCTATA
TGGACAGAGCCTTATATCAACTCTGTTTATTTACATGTTAGATCACTGTT
AAATAGATAATGCTTGGAAATCAAACATATACTTTCCCCTAGATATAAAA
ATGATGCTTTATTGCAGATGTGTCAGACTTTTGCTATCATCCTCTGCAAA
TGTGCTGAGCTACATTTATAGATGTCCCTGTGGNGGCTGTATCTGCTTAC
TTCCTTGAGGGAGAGAAATCAACCAGGGCTCGCAGGAAATTTATTTGAGG
ATTTTGTTTTAAAAACCGAGGTCTTAATGGTAACATTATAAAACCGATGA
GGGAAACGG

GATAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXATCATATGTTCCTAATCATCTGCAAATGGAG
TGAGAAACACTTAAAGGTAGACATTCCAGATATAACAGTGAGGGTTTGTA
AGATGGCTCAGTGGGTAAACTCAAAAGCCTGATGGCATGTGTTCCATCAT
TAAAAGCAATGTTAGAAAGAAAGAACTGGCTCCTATCTACATGCATACCA
TGATGCACATGTGTATTCACACACACACACACACACACACACACACACAT
GCACACACGCGCATAGTAAGTAAATAAAAATTTCAAAAAGACATGACTAT
AACATCTGATGTGTCAGAAATTAAAAAGTCCATAGTTCAACAAAATGTCT
ACTTGAGATTATATTTTTTTTTTGTAGCATGACATACTAACTTGTTGCTG
TTTTTGAGACAGGTCCCATGTAGCCTAGGCTGACCTTGAACTTCTAATCC
ATCTCCCTTCACCCCGAGTGCTAGGTTTACTGTTGTGTACGATCTGGCCC
CTTCTTACTGTGACAATTTTAAGCAGAAATGGGCAAAACACTTTTATGCC
TTTTGGCCCCATCCCAAAAAAAGCCGAAAATTCTTTTTCCAAAACAATTT
TTTTTTATTTAAAAACTTTTTAAGCCCACCCCCCTTACCCCGATAAAAAT
GCCCGCCCCCTCCCTGAACAAAAATTTTAATAAACCCCCCATCCTCGGGT
TTATTAAACGGCCC

Query= MSMg01no379_f14.b1 MSMg01no379_f14.b1 CHROMAT_FILE:
MSMg01no379_f14.b1 PHD_FILE: MSMg01no379_f14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:06 2005
         (495 letters)



>mm_chr9_73328439_73329333
          Length = 895

 Score =  934 bits (483), Expect = 0.0
 Identities = 489/491 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctcaaagatagtatttggaagtctttgtttcaggcactctcttcaatagacctcg 64
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcaaagacagtatttggaagtctttgtttcaggcactctcttcaatagacctcg 264

                                                                       
Query: 65  tttctgacttaagtctcacaaactctttagcgacatcgtcgctggtcctctgagagagta 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tttctgacttaagtctcacaaactctttagcgacatcgtcgctggtcctctgagagagta 324

                                                                       
Query: 125 ttctgaggatggttaaaccagtttcatccatagagagatttttcagaagagggtaccacg 184
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 325 ttctgaggatggttaaaccagtttcatccatagagagatttttcagaagagggtaccatg 384

                                                                       
Query: 185 ccccgtagctccctttctctgctatgttctgtaactgaatgactgtcattccaattattc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ccccgtagctccctttctctgctatgttctgtaactgaatgactgtcattccaattattc 444

                                                                       
Query: 245 gatcttctcgggcaaagcagtagtccttaaccgagaggtgaagttcataggctcctgggc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gatcttctcgggcaaagcagtagtccttaaccgagaggtgaagttcataggctcctgggc 504

                                                                       
Query: 305 ggttctcgttacccagaatgctgtatgaattcaagacataaaatgagtcaaacttgcact 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ggttctcgttacccagaatgctgtatgaattcaagacataaaatgagtcaaacttgcact 564

                                                                       
Query: 365 cacagtgctgaaatactgttaaactttgctcacagcttgctatatggacagagccttata 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cacagtgctgaaatactgttaaactttgctcacagcttgctatatggacagagccttata 624

                                                                       
Query: 425 tcaactctgtttatttacatgttagatcactgttaaatagataatgcttggaaatcaaac 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tcaactctgtttatttacatgttagatcactgttaaatagataatgcttggaaatcaaac 684

                      
Query: 485 atatactttcc 495
           |||||||||||
Sbjct: 685 atatactttcc 695


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 895
Length adjustment: 10
Effective length of query: 485
Effective length of database: 885
Effective search space:   429225
Effective search space used:   429225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)