XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTATGG
TGATTGCATTGAATCTGTAGATTACTTTCGGCAGGATAGCCATTTTTACT
ATATTAATCTTGCCAATCCATGAGCATGGGAGATCTTTCCATCCTCTGAG
ATCTTCATTTTCTTTCTTTGGAGAATTGAAATTCTTGTCATACAGATCTT
TCACTTCCTTAGTTAGAGTCACACCAAGGTATTTTATATTTTTTGTGACT
ATTGTGAAGGATTTTGTCTACCTAATTTCTTTCTCATCCAGTTTATCCTT
TGTGTAGAGAAAGGCCACTGGTTTGTTTGAGTTAATTTTATATCCAGCTA
CTACAGTGAAGCTGTTTATCAGGTTTAGGACTTCTCTGGTGGAATTTTTA
GGGTCACTAATATATACTATCATATCATCTGTAAATAGTGATATTTTGAC
TTCTTCCTTTTCAAATTGTATGCCCTTGATCTCCTATTGTTGTCAAATTG
CTCCGATTAGGACGTCAAGTATCATATTGAATAGGTAGGCAGAAAGTGGG
CAGCCTTGTCTAGTCACTAATTCTAGTGGCATTGACTTGATTTTCTCTCC
ATTTAGCCAAATGTTGGCTACTGGGTTGCTGGATATTGCTTTTATTATGT
TTAAGGATGATCCCTGAAATTCCGATCTCCCTCCATGACGGTTATTAAAA
AAAAGTGGTGGGATTTCTTTCTACCACTTTCTTACCCCCTTATGGGAATG
ATATTGGGG

GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXTTTAATATTTTTTGTATCTTTTTAACAAGAAGGGTGC
ATTATAATAAGGATAGATTATATGACAAAATAGTCTGTATAATAAAAAGA
AGAGAATGAACAAAGGACAGAAATATTCCTTTGTTTTACTGGGATGGGAG
CTATTTGTTCCTAATTTTTATCTTCTCCATTTGCTTTAAGTATTTTATCC
TGTTTTGTTCCTTTTTTGGTTATCAAACCCAATCTTATTATTGTTATTTT
ATATGACACTATTAGATATTTAGTTAGGCAACTTTTACTATTAGAGTATT
TTACTTTTAAACAATATTTTACCACATTTCAACAGGCTTTGTTGACCTAT
CAGTGCTCTCTAAATTAGTATGCCTCACATTGCAGAAACTGTGACAGCCT
CAGGATGTACTACTCTTCTTTAACAGCTTCATTCCTCCTGTACTGCCTTC
TCAGATTTTAATTACAGAATCACTTTAAATTAGTAATATAATGCATTTAG
AATGTACAAAAAAAATAAAGTGTGTGGTTCATAATCATAACTGTATAGTC
CTAGCACACAGTTAGACCACTTGCAGATTCTCTTGGTGGTGCCCACATAG
TCTTTAGTGGAGGAAAGATACCTGCTTACTGTATCCTCACGGGATAAAAA
GTGCTGATGACCCCTGACTTTTAAATTTTTTACCATTCTTATTCCCAAAA
GCCCTTTGTTTT

Query= MSMg01no380_d05.g1 MSMg01no380_d05.g1 CHROMAT_FILE:
MSMg01no380_d05.g1 PHD_FILE: MSMg01no380_d05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:21:12 2005
         (536 letters)



>mm_chr9_5789266_5790199
          Length = 934

 Score = 1006 bits (520), Expect = 0.0
 Identities = 532/536 (99%), Gaps = 2/536 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttaatattttttgtatctttttaacaagaagggtgcattataataaggatagattatat 60
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttaat-ttttttgtatctttttaacaagaagggtgcattataataaggatagattatat 259

                                                                       
Query: 61  gacaaaatagtctgtataataaaaagaagagaatgaacaaaggacagaaatattcctttg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gacaaaatagtctgtataataaaaagaagagaatgaacaaaggacagaaatattcctttg 319

                                                                       
Query: 121 ttttactgggatgggagctatttgttcctaatttttatcttctccatttgctttaagtat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ttttactgggatgggagctatttgttcctaatttttatcttctccatttgctttaagtat 379

                                                                       
Query: 181 tttatcctgttttgttccttttttggttatcaaacccaatcttattattgttattttata 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tttatcctgttttgttccttttttggttatcaaacccaatcttattattgttattttata 439

                                                                       
Query: 241 tgacactattagatatttagttaggcaacttttactattagagtattttacttttaaaca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tgacactattagatatttagttaggcaacttttactattagagtattttacttttaaaca 499

                                                                       
Query: 301 atattttaccacatttcaacaggctttgttgacctatcagtgctctctaaattagtatgc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 atattttaccacatttcaacaggctttgttgacctatcagtgctctctaaattagtatgc 559

                                                                       
Query: 361 ctcacattgcagaaactgtgacagcctcaggatgtactactcttctttaacagcttcatt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ctcacattgcagaaactgtgacagcctcaggatgtactactcttctttaacagcttcatt 619

                                                                       
Query: 421 cctcctgtactgccttctcagattttaattacagaatcactttaaattagtaatataatg 480
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 cctcctgtacggccttctcagattttaattacagaatcactttaaattagtaatataatg 679

                                                                   
Query: 481 catttagaatgtacaaaaaaaataaagtgtgtggttcataatcataactgtatagt 536
           ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 680 catttagaatgtacaaaaaaa-taaagtgggtggttcataatcataactgtatagt 734


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 934
Length adjustment: 10
Effective length of query: 526
Effective length of database: 924
Effective search space:   486024
Effective search space used:   486024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)