Query= MSMg01no380_g22.b1 MSMg01no380_g22.b1 CHROMAT_FILE:
MSMg01no380_g22.b1 PHD_FILE: MSMg01no380_g22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:21:30 2005
(472 letters)
>mm_chr9_49996443_49997314
Length = 872
Score = 760 bits (393), Expect = 0.0
Identities = 419/429 (97%), Gaps = 4/429 (0%)
Strand = Plus / Minus
Query: 5 gaattcagcagc--tttccgtttatctttacaagggaggaaaaaaaatcaattccgtgat 62
|||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gaattcagcagcagtt--agtttatctttacaagggaggaaaaaaaatcaattccgtgat 544
Query: 63 gatttgcttactcaacagttggccgctcttctagatggcagctcttcccagcaatttgct 122
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 543 gatttgcttactcaacagttggccgctcttctagatggcagctcttccctgcaatttgct 484
Query: 123 cggggttgagcaaagctgttgtgagaagccttgatttgtttgtattttatgtctatggcc 182
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 cagggttgagcaaagctgttgtgagaagccttgatttgtttgtattttatgtctatggcc 424
Query: 183 aaaggatgggagaacctgagggagaaaaaataagaaaaaggagagagtgggacaattgaa 242
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 423 aaaggatgggagaacctgagggagaaaaaataagagaaaggagagagtgggacaattgaa 364
Query: 243 ggctggaatgcaaaccgaagcaaacctcctttcatatctcattcgtcaaagagcacgtgg 302
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 363 ggctggaatgcaaaccgaagcaaacctcctttcacatctcattcgtcaaagagcacgtgg 304
Query: 303 cagacacacatgagagaagagaagctccctcaagggaaatggatttaattatagagcaat 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 cagacacacatgagagaagagaagctccctcaagggaaatggatttaattatagagcaat 244
Query: 363 cttgccccaaatacgaaaaataatccatgtgtagagcttcacatacacacacacacacac 422
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 243 cttgccccaaatacgaaaaataatccatgtgtagagcttcacacacacacacacacacac 184
Query: 423 acacacaca 431
|||||||||
Sbjct: 183 acacacaca 175
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 46
Number of extensions: 9
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 472
Length of database: 872
Length adjustment: 10
Effective length of query: 462
Effective length of database: 862
Effective search space: 398244
Effective search space used: 398244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no380_g22.g1 MSMg01no380_g22.g1 CHROMAT_FILE:
MSMg01no380_g22.g1 PHD_FILE: MSMg01no380_g22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:21:30 2005
(183 letters)
>mm_chr9_49778969_49779551
Length = 583
Score = 257 bits (133), Expect = 2e-73
Identities = 136/137 (99%)
Strand = Plus / Plus
Query: 10 taatgcctttagtaatttagagacgaagggtgggtgctgatttggggattggcagcagct 69
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 210 taatgcctttagtaatttagagacgaagggtgggtgctgacttggggattggcagcagct 269
Query: 70 cttagaaaatacctagtggctaatgggctggggtttgctttgcttcctaagagtaggaca 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 cttagaaaatacctagtggctaatgggctggggtttgctttgcttcctaagagtaggaca 329
Query: 130 gtataatatatatatat 146
|||||||||||||||||
Sbjct: 330 gtataatatatatatat 346
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 183
Length of database: 583
Length adjustment: 8
Effective length of query: 175
Effective length of database: 575
Effective search space: 100625
Effective search space used: 100625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
