Query= MSMg01no381_b10.b1 MSMg01no381_b10.b1 CHROMAT_FILE:
MSMg01no381_b10.b1 PHD_FILE: MSMg01no381_b10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:22 2005
(426 letters)
>mm_chr9_51700673_51701498
Length = 826
Score = 816 bits (422), Expect = 0.0
Identities = 422/422 (100%)
Strand = Plus / Plus
Query: 5 gaattcagatccttgtagttcaagatatgcaagccttcatgtcaaataggctgatgggga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagatccttgtagttcaagatatgcaagccttcatgtcaaataggctgatgggga 264
Query: 65 gtttttaaatggggtgaaactcccctttcttcttcctacgcagagtctctgacctttcta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtttttaaatggggtgaaactcccctttcttcttcctacgcagagtctctgacctttcta 324
Query: 125 cccctcccaggatccgtctcctttccttccagcctaaactcaggaatctccttacagcct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cccctcccaggatccgtctcctttccttccagcctaaactcaggaatctccttacagcct 384
Query: 185 caccatttcccatgccacctgtgtttccatattgaggttaccacatatactaaggggaag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 caccatttcccatgccacctgtgtttccatattgaggttaccacatatactaaggggaag 444
Query: 245 gcagggtggttggaagtttctggaagccagaggccatgtcttgccactcctggctgtcct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gcagggtggttggaagtttctggaagccagaggccatgtcttgccactcctggctgtcct 504
Query: 305 tccagctaggagtttcatcccatttcactgtgttcccattttacacaggccagaggtcaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tccagctaggagtttcatcccatttcactgtgttcccattttacacaggccagaggtcaa 564
Query: 365 agtactggtgccaaattcaatgtcaagataatcctggatcagcctccctttgactgatgg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agtactggtgccaaattcaatgtcaagataatcctggatcagcctccctttgactgatgg 624
Query: 425 tt 426
||
Sbjct: 625 tt 626
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 826
Length adjustment: 9
Effective length of query: 417
Effective length of database: 817
Effective search space: 340689
Effective search space used: 340689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no381_b10.g1 MSMg01no381_b10.g1 CHROMAT_FILE:
MSMg01no381_b10.g1 PHD_FILE: MSMg01no381_b10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:22 2005
(478 letters)
>mm_chr9_51880166_51881043
Length = 878
Score = 422 bits (218), Expect = e-122
Identities = 248/266 (93%), Gaps = 13/266 (4%)
Strand = Plus / Minus
Query: 226 aaaaggggaaacagtgccatgaagacttatctgtctgttatgagttctgatatcatttgg 285
||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 660 aaaaggggaaacagtgccatgaagatttagctgtctgttatgagttctgatatcatttgg 601
Query: 286 gggaagaggacttggggattaacatagccaaatttgtcatcagacatctagaaagagcct 345
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 gaaaagaggacttggggattaacatagccaaatttgtcatcagacatctagaaagagcct 541
Query: 346 acctttggtcaaactccatgttggtgaccaaaaccaaaaagatgaataaaagacaccaag 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 acctttggtcaaactccatgttggtgaccaaaaccaaaaagatgaataaaagacaccaag 481
Query: 406 ttgttacttcatatgcttaactttcaaattattatttcaatgatagtatttattc----- 460
||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 480 ttgttacttcatatgcttaactttcaaattattatttcaatgatactatttattcactaa 421
Query: 461 --------catctctgtcatctccta 478
||||||||||||||||||
Sbjct: 420 agttattccatctctgtcatctccta 395
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 478
Length of database: 878
Length adjustment: 10
Effective length of query: 468
Effective length of database: 868
Effective search space: 406224
Effective search space used: 406224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
