Query= MSMg01no381_c14.b1 MSMg01no381_c14.b1 CHROMAT_FILE:
MSMg01no381_c14.b1 PHD_FILE: MSMg01no381_c14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:28 2005
(505 letters)
>mm_chr9_97350451_97351355
Length = 905
Score = 963 bits (498), Expect = 0.0
Identities = 501/502 (99%)
Strand = Plus / Minus
Query: 4 gaattcattgaatttccatgtcataaactttttactctcttatttctcattttctactca 63
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 gaattcattgaattttcatgtcataaactttttactctcttatttctcattttctactca 646
Query: 64 aaacttagcctgctagacatctagaaagctagccactaggcagatccatgtgaggctgac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 aaacttagcctgctagacatctagaaagctagccactaggcagatccatgtgaggctgac 586
Query: 124 tctcaccctcaatacataaaaagcatccatccctcccccatccctctaccccaaagaaaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 tctcaccctcaatacataaaaagcatccatccctcccccatccctctaccccaaagaaaa 526
Query: 184 cacccaacagctccctagtggtcattgccttgaattgaacagctggaaaactctgggttc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 cacccaacagctccctagtggtcattgccttgaattgaacagctggaaaactctgggttc 466
Query: 244 tttcattaaagctctcttagaagttcacaggagactggagaaaacgcaaaagaaaccggt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 tttcattaaagctctcttagaagttcacaggagactggagaaaacgcaaaagaaaccggt 406
Query: 304 aaatgagcaaccaaaatcccacttgttatttctgaattgaagaaatcagacaaatattcc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 aaatgagcaaccaaaatcccacttgttatttctgaattgaagaaatcagacaaatattcc 346
Query: 364 taagggttggatgcctagacccagagacctgggtaatcactgagcacaggggcttcctcc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 taagggttggatgcctagacccagagacctgggtaatcactgagcacaggggcttcctcc 286
Query: 424 tctgctgtggcaagtgctaactccccaggctaagcaccttcctggcagggctcagtccat 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 tctgctgtggcaagtgctaactccccaggctaagcaccttcctggcagggctcagtccat 226
Query: 484 aatgatttctaagcaggagtgt 505
||||||||||||||||||||||
Sbjct: 225 aatgatttctaagcaggagtgt 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 905
Length adjustment: 10
Effective length of query: 495
Effective length of database: 895
Effective search space: 443025
Effective search space used: 443025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no381_c14.g1 MSMg01no381_c14.g1 CHROMAT_FILE:
MSMg01no381_c14.g1 PHD_FILE: MSMg01no381_c14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:28 2005
(496 letters)
>mm_chr9_97144943_97145837
Length = 895
Score = 928 bits (480), Expect = 0.0
Identities = 492/496 (99%), Gaps = 1/496 (0%)
Strand = Plus / Plus
Query: 1 tgggatagagttaggtataggggattcatcagggaagatgtgacaagatgcatggttcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgggatagagttaggtataggggattcatcagggaagatgtgacaagatgcatggttcct 260
Query: 61 gagcacaggtaatcagccacatggcagaatataggttaaaataaatggggtattttaagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagcacaggtaatcagccacatggcagaatataggttaaaataaatggggtattttaagc 320
Query: 121 tatggccttgtcagagaagaaactagctatatggccaaggtatttgtaaatatattttga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatggccttgtcagagaagaaactagctatatggccaaggtatttgtaaatatattttga 380
Query: 181 gtctgagtcttatatttgggagcatgaggctggaaggaagaactagaccaaacttctatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtctgagtcttatatttgggagcatgaggctggaaggaagaactagaccaaacttctatg 440
Query: 241 atgctgttagtatctccccaatactaaatgtaaaagttaacttggagtgtctgcaaaacc 300
|||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgctgttaggaac-ccccaatactaaatgtaaaagttaacttggagtgtctgcaaaacc 499
Query: 301 acagcccttttctctagtgtcttcctactgtctggagaggactgactgatgaaataagtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 acagcccttttctctagtgtcttcctactgtctggagaggactgactgatgaaataagtg 559
Query: 361 ttcagccataatgtgaccttaagaataatgttagcagccatcaatcatggtaaacttccg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ttcagccataatgtgaccttaagaataatgttagcagccatcaatcatggtaaacttccg 619
Query: 421 cttgtgtgcaccattattaacctgtacttcttgtgtctcttcatgacctatgtggacttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 cttgtgtgcaccattattaacctgtacttcttgtgtctcttcatgacctatgtggacttt 679
Query: 481 ttgttaaatgctgaag 496
|||| |||||||||||
Sbjct: 680 ttgtaaaatgctgaag 695
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 496
Length of database: 895
Length adjustment: 10
Effective length of query: 486
Effective length of database: 885
Effective search space: 430110
Effective search space used: 430110
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|